Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02389 ATGGCAGGGGATGAAGCTATTAAACATGCTTCTACAACCACCACCACCACTACTCCTATGTCAAAATCAAACAAATCAACCATGAAAAGGTTCATTGGTGTGAGGCAGAGGCCTTCAGGAAGATGGGTGGCTGAGATCAAAGACTCATCACAACATGTGAGATTATGGCTTGGGACCTATGACACACCAGAGGAGGCTGCAAGGGCCTATGACGAAGCGGCACGTGTCCTACGAGGCGAAAATGCAAGAACAAACTTTGCATTATTTGGTTCTGATACCAATGGAAGTTCCAGTAAATTGTTACCTGAGTCTGACGGAAAAAGCAGACTGAGTTTCCCTTCATTAAAAGCGAAACTCAGTAAGAATCTTCAAAACATTATAGCAAGAACAAGCGATAATAACAATAACAGTATGAAATCTTCGTCGGCAAAGAGTAGGGTGAGTGATCATTTCACTTTTGCTAGCATATTCAAAAGAAGAAATTGTTACCAACAATACCCTCATCAAATGCCTAGTCCAATTGATATGAAGAACATTGATAAAGTTGTGCAACCTAGTATCATTGTTCCCCCTTTGGAAAATGATCATAACCACAACAATAATCATAATGGTTCTTCATCATCATGGGAAAATTCTAGTGTTTCTGATTGTAGCAGCTGTGATTGGTTCGGATCAGATTTTGGAGATTTCAGTGTTGGTGATCAAGGGTATTTGGATCAATTGTTGGGGTGGGTTGAAAGTTCAAATCTTTGTTCAAATGGGGTTGGTGATTTTGATGATGAGAGTTCAAGGAGTAAGAGGTTTAAGGTGTCTTCTACAGTGCTTGTTCCTCCAACTTTCACATCTTCATCATATGATTATTGTGGTTCACCTTATGATTATTATAATTATAATACTAATAATGGATGTGGCTCTCCATGTAGTGGTTATGCCTCTCCATATAATGGGTTCCGGCTCCAAACCTTCGATTCCTCCGATAAGCATTTGCAGGTTCTGTGA 999 0.3984 MAGDEAIKHASTTTTTTTPMSKSNKSTMKRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARVLRGENARTNFALFGSDTNGSSSKLLPESDGKSRLSFPSLKAKLSKNLQNIIARTSDNNNNSMKSSSAKSRVSDHFTFASIFKRRNCYQQYPHQMPSPIDMKNIDKVVQPSIIVPPLENDHNHNNNHNGSSSSWENSSVSDCSSCDWFGSDFGDFSVGDQGYLDQLLGWVESSNLCSNGVGDFDDESSRSKRFKVSSTVLVPPTFTSSSYDYCGSPYDYYNYNTNNGCGSPCSGYASPYNGFRLQTFDSSDKHLQVL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02389 332 SUPERFAMILY DNA-binding domain 30 87 IPR016177 GO:0003677
Adu02g02389 332 Pfam AP2 domain 30 79 IPR001471 GO:0003700|GO:0006355
Adu02g02389 332 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 256 - -
Adu02g02389 332 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 256 - -
Adu02g02389 332 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Adu02g02389 332 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Adu02g02389 332 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Adu02g02389 332 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Adu02g02389 332 MobiDBLite consensus disorder prediction 1 28 - -
Adu02g02389 332 CDD AP2 29 87 IPR001471 GO:0003700|GO:0006355
Adu02g02389 332 MobiDBLite consensus disorder prediction 8 28 - -
Adu02g02389 332 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02389 Adu-Chr2 89355996 89358782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02389 7 87 AP2-EREBP Transcription Factor Family AT5G19790 61.728 1.59e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu02g02389 AP2 4.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02389 K09286 - gmx:100799444 332.413