Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02387 ATGCTTTTAGTAAACAAGTTTTTTGTCTGTGATCATCAAGATTCTTCATACTATACAATATTCATTTCTTGTTCAACAGAAGAATGGTTGCTTAATGCACAGAAGCTTGTTCCTGCAGCAATGTCTAAGGCAAAAGAGGTTAAAGTTTTCCCAGTCAAGTGGAAGATGATTATCTCGAAATTGGAGCAGATTCCGTCGCGTTTATCGGACTTGTCGAGCCACCCTTGCTTCTCCAAGAATGCTCTCTGCAAGGAGCAGTTGCAGTCAGTTTCCAAGTCACTCGAAGAAGCTATCGAATTGGCCGAGCTTTGTTTGAAGGAGAAGTATGAAGGTAAGCTTCGGATGCAGAGTGATCTCGACGCTTTAGCTGGGAAACTCGATTTAAATCTGAAAGATTGCAGCTTGCTGATCAAAACCGGTGTGCTAGGAGAAGCTACTCTGCCTTTGATGGTGTCTGGTTCTGTTCATGACTCTGATGTAGATTTTGCATCCATTAAGGAATTACTTGCAAGGCTTCAGATAGGTAACTTGGAAGCCAAGCAAAGAGCACTGGAGAAGCTCTATGATGTGATGAAAGAAGATGAGAAGAATGTTTTGGCTGTTCTTGGGAGAAGCAATGTTGCTGCATTGGTTCAACTGCTTACAGCAACATCTCCAAGGATTAGGGAAAAGGCTGCTACTGTGATATGTATTCTTGTGGAATCCGGGGACTCTGTTTCTCAGGCTGCAGCCGCTTGTGCTTTGAAGAATGCGTCGTCCGTGCCGGATGTGAGGCAGGTTTTGGCTGAAGAAGGCATTGTGAAAGTGATGATTGAGCTCCTTAGCTCTGGAATTTTGTTGGGAACGAAAGAGTATGCGGCCGAGTGCTTGCAGAATCTAACAGCGAGCAACGAGAATCTAAGAAGATCTGTCATAGCAGAAGGTGGTTTCAGCAGTCTCCTGGCCTATCTTGATGGCCCTCTTCCTCAAGAATCCGCGGTCGCAGCCCTGAGGAATTTGGTTGGTTCTGTTTCTGAGGATGTTCTGGATTCCCTCGGCTTGCTTCCTCGATTGGTTCACGTGCTTAAGTCGGGTTCCTTGGGAGCCAAGCAAGCCGCAGCCTCTGTCATTTGCCGGATTTGTGGCCCGGTTGAGATGAAAAAAATGATCGGCGAAGCCGGCTGCATACCTCTTCTGATCAATTTGCTTGAGGCTAAAGCAAATAGTGCTAGAGAAGCTGCATCACAAGCAATTTCGAGCTTGATGGTTCTGTCTGCGAATCGAAGAGAGGTTAAGAAGGATGATAAGATTGTGGTGCCAAGTTTGGTTCAGTTGCTTGATCCAAATCCACAGAACACTGCAAAGAAATATGCAGTTTCATGCCTTGCATCACTGTCTTCTTGCAAGAAATGTAAGAAGCTTATGATTTCTTATGGAGCAATAGGGTATCTCAAGAAGCTTAGTGAGATGGATATTCCTGGATCTAAGAAGCTTCTAGAGAGATTGGAAAGAGGAAAACTCAGAAGCTTGTTCAGCAGAAAATAA 1524 0.4469 MLLVNKFFVCDHQDSSYYTIFISCSTEEWLLNAQKLVPAAMSKAKEVKVFPVKWKMIISKLEQIPSRLSDLSSHPCFSKNALCKEQLQSVSKSLEEAIELAELCLKEKYEGKLRMQSDLDALAGKLDLNLKDCSLLIKTGVLGEATLPLMVSGSVHDSDVDFASIKELLARLQIGNLEAKQRALEKLYDVMKEDEKNVLAVLGRSNVAALVQLLTATSPRIREKAATVICILVESGDSVSQAAAACALKNASSVPDVRQVLAEEGIVKVMIELLSSGILLGTKEYAAECLQNLTASNENLRRSVIAEGGFSSLLAYLDGPLPQESAVAALRNLVGSVSEDVLDSLGLLPRLVHVLKSGSLGAKQAAASVICRICGPVEMKKMIGEAGCIPLLINLLEAKANSAREAASQAISSLMVLSANRREVKKDDKIVVPSLVQLLDPNPQNTAKKYAVSCLASLSSCKKCKKLMISYGAIGYLKKLSEMDIPGSKKLLERLERGKLRSLFSRK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02387 507 Pfam Armadillo/beta-catenin-like repeat 378 414 IPR000225 GO:0005515
Adu02g02387 507 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 19 236 - -
Adu02g02387 507 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 233 507 - -
Adu02g02387 507 SMART arm_5 338 375 IPR000225 GO:0005515
Adu02g02387 507 SMART arm_5 417 460 IPR000225 GO:0005515
Adu02g02387 507 SMART arm_5 296 335 IPR000225 GO:0005515
Adu02g02387 507 SMART arm_5 253 295 IPR000225 GO:0005515
Adu02g02387 507 SMART arm_5 194 234 IPR000225 GO:0005515
Adu02g02387 507 SMART arm_5 376 416 IPR000225 GO:0005515
Adu02g02387 507 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 233 507 - -
Adu02g02387 507 SUPERFAMILY ARM repeat 165 487 IPR016024 -
Adu02g02387 507 Gene3D - 162 341 IPR011989 -
Adu02g02387 507 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 19 236 - -
Adu02g02387 507 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 265 309 IPR000225 GO:0005515
Adu02g02387 507 Coils Coil 174 197 - -
Adu02g02387 507 Gene3D - 342 486 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02387 Adu-Chr2 89346254 89348199 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02387 293 465 U-box Gene Family AT2G28830 31.492 1.38e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02387 - - mnt:21387230 602.053