Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02381 ATGGCTGCGTCAGTGGGTGGAAGTAGGCTTCAAAGCATGTTGCAAGCTGCAGTTCAATCTGTTCAATGGACCTACAGCCTCTTCTGGCAACTTTGTCCACAACAAATGATTTTGGTTTGGGGCGATGGTTACTACAATGGAGCAATTAAGACAAGGAAGACAGTGCAACCAATGGAGGTTAGTGCTGAGGAGGCATCTCTCCAAAGAAGCCAACAGCTCAGGGAACTCTATGACTCCTTGTCCGCCGGAGAGACGAATCCGCCCACTCGCCGCCCTTGCGCCGCCTTGTCGCCGGAGGACCTAACGGAATCCGAATGGTTCTATTTGATGTGTGTCTCATTCTCATTTCCTCCTGCTGTTGGGTTGCCGGGAAAGGCATATGCTAGGAGGCAGCATGTATGGCTCACAGGTGCAAACAAGTctACCGTGGTGTGCATTCCTCTATTGGACGGTGTCGTTGAGTTTGGCACAATAGATAAGGTTCAAGAAGATATTAAGTTTATCCAACACGTGAAGAGTTTTTTCATAGAACACCACCACGCCTCCGTCCATCCTCCGCCGCCGCCAAAGCCAGCCCTCTCAGAGCACTCCACCTCCAATCCTGCATCCTCATCTGACTGCCTCATTTATACCGTAACGGACCCACCATTTCCTCCGCCTAACCTTACCAATGAAGACAATATGGAAGAAGACCAAGACAATGAGGAAGAAGAAGAGGAAGAGGAGGACGAGAATGATGAAGAAGAAGAACCCATATTGGACTCTGAAGATGAAAAGAGACGAAATAATAATAATGTTTCAGGTGGAATTACAGAACCAAGTGAGTTGATGCAATTAGAAATGTCTGAAGATATTAGAGTTGGATCACCTAATGACGGATCAAATAATCTTGATTCCAATTTTCATTTACTAGCCGTTACCGAAGCAGATAATCAGTCGGGTCAAGTCGACTCTTATCGAGTTGACCCGACCCAAAGATGGGATCCAATTCAAAGCCCTTTGGATCAGCTCCAAGTTCAACTACCAGTCTTTTCACCTATAGAAGATCAAATATTGACACAAGAAGATGATCACTATTCTCAAACCGTATCAAGCATCCTCCAAAACCAATCAACCCGTTGGGTTGACTCTCCTTCAATAGCATGCTACGTCACTTGCTCCAACCAATCAGCATTCGCCAAGTGGACATCCCTCGTCGCCGACGAACATCTCCACGCCGCCACGGTCGACGGCTCCTCCCAATGGCTACTAAAATACATCTTATTTACCGTGCCCTACCTACACTCCAACAAAAACAATGAAGAAAACAATAGTTCTCCAAATAACACAAACCCTACCAGCTCAGCCGGTCCGTCAGACCGGCTGCGCGGAGGGGGAAAAGGCAGTGGCACTCCGCAAGACGAGCTGAGTGCAAACCATGTCCTGGCGGAGCGCCGCCGCCGTGAGAAGCTAAATGAGAGATTCATCATCCTAAGATCACTTGTCCCATTTGTTACCAAAATGGACAAAGCTTCAATTTTAGGTGACACAATTGAATATGTGAAACAACTTAGAAGGAAGATCCAAGACTTAGAGGCACATATCCGACAAATGGAAGCTGAACAACAACGTTCGAGGACACCATCAACAACAATTGAAGTTCACCATTGTGGCTCCTCCAACAAGGAGCAACAACAACACACGGTTGTGGTAGGGCATGAGAAGAGGAAGGTGAGGATTGTGGAGGGGACGAAGACCGCAACCAAGGTGGTGGCGGCGGCGGCCACAGAGGCATCGGTGCAGGTTTCGATTATAGAGAGTGATGCATTGTTGGAGTTGGAGTGTAGTCATAGGGAAGGGTTACTACTTGATGTGATGTTGGTGTTAAGAGAGATGAAGATTGAGGTTATTGGGGTTCAATCCTCACTCAACAATGGAGTTTTTGTGGCTGAATTGAGGGCCAAGGTTAAGGACAATAATTCTGGGAAGAAGGTTAGCATTGTGGAAGTCAAGAGGGCATTAAATCAGGTTATACCCCATACTGGTGATTAA 2031 0.4702 MAASVGGSRLQSMLQAAVQSVQWTYSLFWQLCPQQMILVWGDGYYNGAIKTRKTVQPMEVSAEEASLQRSQQLRELYDSLSAGETNPPTRRPCAALSPEDLTESEWFYLMCVSFSFPPAVGLPGKAYARRQHVWLTGANKSTVVCIPLLDGVVEFGTIDKVQEDIKFIQHVKSFFIEHHHASVHPPPPPKPALSEHSTSNPASSSDCLIYTVTDPPFPPPNLTNEDNMEEDQDNEEEEEEEEDENDEEEEPILDSEDEKRRNNNNVSGGITEPSELMQLEMSEDIRVGSPNDGSNNLDSNFHLLAVTEADNQSGQVDSYRVDPTQRWDPIQSPLDQLQVQLPVFSPIEDQILTQEDDHYSQTVSSILQNQSTRWVDSPSIACYVTCSNQSAFAKWTSLVADEHLHAATVDGSSQWLLKYILFTVPYLHSNKNNEENNSSPNNTNPTSSAGPSDRLRGGGKGSGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRRKIQDLEAHIRQMEAEQQRSRTPSTTIEVHHCGSSNKEQQQHTVVVGHEKRKVRIVEGTKTATKVVAAAATEASVQVSIIESDALLELECSHREGLLLDVMLVLREMKIEVIGVQSSLNNGVFVAELRAKVKDNNSGKKVSIVEVKRALNQVIPHTGD 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02381 676 MobiDBLite consensus disorder prediction 195 210 - -
Adu02g02381 676 MobiDBLite consensus disorder prediction 532 559 - -
Adu02g02381 676 MobiDBLite consensus disorder prediction 432 474 - -
Adu02g02381 676 MobiDBLite consensus disorder prediction 535 559 - -
Adu02g02381 676 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 175 IPR025610 -
Adu02g02381 676 PANTHER TRANSCRIPTION FACTOR TT8 9 673 - -
Adu02g02381 676 MobiDBLite consensus disorder prediction 180 276 - -
Adu02g02381 676 Pfam Helix-loop-helix DNA-binding domain 471 518 IPR011598 GO:0046983
Adu02g02381 676 Gene3D - 464 535 IPR036638 GO:0046983
Adu02g02381 676 Coils Coil 514 537 - -
Adu02g02381 676 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 468 517 IPR011598 GO:0046983
Adu02g02381 676 SMART finulus 474 523 IPR011598 GO:0046983
Adu02g02381 676 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 470 541 IPR036638 GO:0046983
Adu02g02381 676 Coils Coil 225 250 - -
Adu02g02381 676 PANTHER TRANSCRIPTION FACTOR TT8 9 673 - -
Adu02g02381 676 MobiDBLite consensus disorder prediction 226 253 - -
Adu02g02381 676 MobiDBLite consensus disorder prediction 432 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02381 Adu-Chr2 89194855 89207399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02381 352 673 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 41.486 1.24e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu02g02381 bHLH-MYC_N 1e-41 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02381 - - adu:107475781 1215.29