Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02340 ATGGCTTCCGAACCTTCCAGAAACATTGATCTCACGCTTGGAGAGCCCAAAGGGCCCAAGGAGGAGCCCGACACGGAGGACCCCTCGCCGTCAACGTCTCCGCCATCGGCCATACGCGTCATGCCGGTGGCAGTGCACATGCCGTCCATGTCCATGAACAAGGCCTTAGTCCAAGCCCAAGCCCAGGCCCATCCAACTCAAAAGAGAGCCTCCACGAAGGACAGGCACACCAAGGTGGAGGGGCGCGGCAGGAGAATCCGAATGCCTGCCACGTGTGCGGCCCGGATCTTCCAGCTCACCCGGGAGCTCGGCCACAAGTCCGACGGAGAAACCATCCGGTGGCTTCTGGAGCACGCCGAGCCGGCAATCATCGCCGCAACCGGGACCGGCACCGTTCCCGCCATCGCCATGTCTGTCAACGGAACACTTAAGATCCCAACTACCAAACCACTATCAGGATCCGACCCGGAACCGGGAGACCCGCCCTGCAAGAAGAAGCGCAAAAGACCCGCCAATAGCGCCTACGTGGATGTTAACGAAAGCGCTGTTTCAGTCTCCGCAGGCCTGACGGTTACAACAAATTCCGTAACTAACACCCTAACAAACTCCACAACCTCCTCCGCCACTCACATAACAAACTCTGTAACGGCCGCTATAATACCGCAGCAAACCGCTATTGCCTTACCGCAAAACGCGGTACCTGCCATGTGGACGGCGATTCCGTCCAACGCTTTCTTCGTCGTGCCTTCCGTGGCGGCGGCGGGACCTTCCAACGCGCCGCAATTCTTCACATTCGCACGTCCGATTTCGGCGTTTGTTTCGTCGGTGATGACGCCGGTTCAAATTCAACCGGCCGGTTCGACTGCTCCGTCGTCGAAATCTCCGCCAAGAGCGACGGTTATGGCGCCGAGCAGTGCAACTACGACAACGCACACGCTGAGGGATTTCTCACTGGAGATTTACGATAAGCAGGAGCTTCAGTTCATGTCGAAGTCGAGTTCAAAGCATTGA 1011 0.5796 MASEPSRNIDLTLGEPKGPKEEPDTEDPSPSTSPPSAIRVMPVAVHMPSMSMNKALVQAQAQAHPTQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTKPLSGSDPEPGDPPCKKKRKRPANSAYVDVNESAVSVSAGLTVTTNSVTNTLTNSTTSSATHITNSVTAAIIPQQTAIALPQNAVPAMWTAIPSNAFFVVPSVAAAGPSNAPQFFTFARPISAFVSSVMTPVQIQPAGSTAPSSKSPPRATVMAPSSATTTTHTLRDFSLEIYDKQELQFMSKSSSKH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02340 336 Pfam TCP family transcription factor 71 166 IPR017887 -
Adu02g02340 336 MobiDBLite consensus disorder prediction 146 172 - -
Adu02g02340 336 MobiDBLite consensus disorder prediction 1 37 - -
Adu02g02340 336 PANTHER TRANSCRIPTION FACTOR TCP9 20 334 - -
Adu02g02340 336 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 334 IPR005333 GO:0003700
Adu02g02340 336 ProSiteProfiles TCP domain profile. 72 126 IPR017887 -
Adu02g02340 336 MobiDBLite consensus disorder prediction 62 82 - -
Adu02g02340 336 MobiDBLite consensus disorder prediction 68 82 - -
Adu02g02340 336 MobiDBLite consensus disorder prediction 283 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02340 Adu-Chr2 88752719 88753729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02340 7 335 TCP Transcription Factor Family AT2G45680 49.211 4.84e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu02g02340 TCP 2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02340 - - aip:107626029 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02340 02 88752719 88753729 Adu02g02340 02 88752719 88753729 ECH