Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02315 ATGGCGATGAGGGCGGCAGCGTTGGCAGCTCCCGGAGGTTTGCGGCGGCTCTTCTGCACAAACACGACGAAGCCATCTTTGAGCTTCCCCTTCATTCCGCCTCCACAGGCGGGGGCGCAGCCAGCTCGGCCTATGGCGGAACCCAACACCAACCTCTTCGTCTCTGGGCTTAGCAAACGTACTACTTCAGAGAAGTTGAGAGACGAATTTGCAAAGTTTGGTGAAGTTGTTCACGCAAGGGTGGTAACTGACCGAGTATCAGGTTACTCTAAGGGGTTTGGTTTTGTGAAGTATGCCACTCTAGAAGATGCTGCAAAGGGCATCGAGGGCATGGATGGCAAGTTTTTGGATGGCTGGGTTATCTTCGCTGAGTACGCAAGGCCAAGACCTCCGCCGGGACAACCTGAAAACAATATGCCACCTCAATATGGGCGGCAGGACACGGTGTTGGTGCTGATGTTTCGAGTTATTTGGATGCGCACAAGATATAACGGTGGTGATGGTAAAGTATAA 513 0.5263 MAMRAAALAAPGGLRRLFCTNTTKPSLSFPFIPPPQAGAQPARPMAEPNTNLFVSGLSKRTTSEKLRDEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPENNMPPQYGRQDTVLVLMFRVIWMRTRYNGGDGKV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02315 170 PANTHER TRANSFORMER-2-RELATED 1 146 - -
Adu02g02315 170 SUPERFAMILY RNA-binding domain, RBD 25 145 IPR035979 GO:0003676
Adu02g02315 170 Gene3D - 36 168 IPR012677 -
Adu02g02315 170 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 52 118 IPR000504 GO:0003723
Adu02g02315 170 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 50 128 IPR000504 GO:0003723
Adu02g02315 170 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 1 146 - -
Adu02g02315 170 SMART rrm1_1 51 124 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02315 Adu-Chr2 88272149 88275526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02315 49 130 Eukaryotic Initiation Factors Gene Family AT4G34110 35.366 3.90e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02315 - - gmx:100789351 199.134