Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02266 ATGGAAGCTAGAGAAGGCATTAGTTCCGGGGTTACGGTGATAGGGGCAGAAGCTCCATCAGCATATCATGTGGCACCAAGGAGTGAAGCTCCAAACCAGGTTCATGTGCCTGAGGGAGGCACGGCAGCTGTGGCTGCGGCTGCTGCTGCCGCTGCCGGGGTTTCTCCGGTGAGTGTGGGGATAGATGGATCGATGCTTAAGAAGAAACGGGGTAGACCGAGGAAATATGGGCCGGATGGATCTGTCACTATGGCATTGTCACCATTGCCACTCTCATCTTCAGGTCCACATTCAAATGACTTTTCGTCCGGTAAACGGGGGAAATCGAAGGGGACGGAGTACAAGCAGTCGAAAAAACTTGGGTTTGATCAACTAGGTGAATATAATGCATGTGCTGATGGTACAAACTTTCTGCCACATATCATCACTGTTAATGCTGGAGAGGACATTACCATGAAGGTTATATCGTTTTCTCAGCAAGGACCGCGAGCTATATGCATCTTATCTGCTAGTGGTGTAATTTCAAATGTCACCCTTCGTCAACCTGATTCTTCTGGAGGCACTTTGACCTATGAGGGCCGTTTCGATATACTTTCTTTGTCGGGATCGTTCATGCCTACTGACAACCAAGGAACACGAAGCAGGACGGGTGGGATGAGTGTCTCGTTGGCAAGCCCTGATGGTCGTGTTGTAGGTGGTGGTGTTGCCGGACTTCTAGTAGCCGCTAGTCCGGTGCAGGTGGTGGTGGGAAGTTTCCTGCCAAGCAACCAACAAGATCAGAAACCAAAGAAGCCGAAGCCAACTGATTATTCCACGCCCGTTGTTACTCCCGTTGTTACTCCGGCAGTCATCTCGATGTCTTCTGCACCAAGTCACCCGAGCAATGCTGAGAAAGATGATCATGTGATGGGTGGTGCACACCATGTGATGCAAAACTCATCATCAAACCTTACCCCTTCTCCCTTCAGAAGAGAAAATTGGGTGAACATGCACTCCCTGCAACAAGACTCAAGAAAGTCGGCTACCGACATCAACATATCTTTGCCAGATAGTTAA 1056 0.4953 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPEGGTAAVAAAAAAAAGVSPVSVGIDGSMLKKKRGRPRKYGPDGSVTMALSPLPLSSSGPHSNDFSSGKRGKSKGTEYKQSKKLGFDQLGEYNACADGTNFLPHIITVNAGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFDILSLSGSFMPTDNQGTRSRTGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPSNQQDQKPKKPKPTDYSTPVVTPVVTPAVISMSSAPSHPSNAEKDDHVMGGAHHVMQNSSSNLTPSPFRRENWVNMHSLQQDSRKSATDINISLPDS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02266 351 MobiDBLite consensus disorder prediction 86 102 - -
Adu02g02266 351 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 350 - -
Adu02g02266 351 MobiDBLite consensus disorder prediction 253 274 - -
Adu02g02266 351 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 350 IPR039605 GO:0003680
Adu02g02266 351 SUPERFAMILY AF0104/ALDC/Ptd012-like 137 255 - -
Adu02g02266 351 Gene3D - 139 267 - -
Adu02g02266 351 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
Adu02g02266 351 MobiDBLite consensus disorder prediction 331 351 - -
Adu02g02266 351 MobiDBLite consensus disorder prediction 65 113 - -
Adu02g02266 351 ProSiteProfiles PPC domain profile profile. 134 276 IPR005175 -
Adu02g02266 351 CDD DUF296 139 229 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02266 Adu-Chr2 87500515 87505233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02266 6 348 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 52.575 1.44e-102 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02266 - - gmx:100793726 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g02266 02 87500515 87505233 Adu02g02266 02 87500515 87505233 ECH
Adu04g02194 04 104093194 104095390 Adu02g02266 02 87500515 87505233 PCT