Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02228 ATGCAACTAAAATTTTCAGTTTTTCCAAATCTAGTCCGTCTAGATTTCAGTGAAATGGGGTTATGTGAATTCCCTAAACTAAGGGGTCTCAAGAAGCTACAACATCTCAACCTATCATACAACCGTTTTTCAGGTGAGGCTCCTTTAGCATTATTGACAAATCTAACTCAACTTGTGGTGTTGGACATTTCCAATAACCAATACATTAGTGGTCCAATTCCACAAGAACTAAGCAAACTGCAGAGACTTGTCACGTTGGACTTGAATGCCAACGTGCTCAGCAAAGGCATTCCATTGATCTTGGGTCAAATGAGCAGTCTCACACACATGAAACTTTCCAATAATCTCCTGTATGGGGATCTTCCTTTCACACTGGCAAATCTAACTCAACTTCTTGTGTTGGACCTTTTCCAAAACAAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACATGAGTTCAAATTCCCTGTCTGGTCCAATTCCTGAGCAAATTGGGTACTTGAACCATTTGACAAGTCTCCACCTTCATTCAAATTTGCTTAGTGGCTCTATACCTTCAAATATAGGACTTTTGACCCGTTTGGAAGTGCTCACCATTGGATCCAACATGATAGATGGTTGTATCCCCAAAGAAATAGAGCATTTGTTGCATCTAAAAGTTTTAGATCTCTCTTATAATGCTATTTCTGGTGTTATCCCATCTTCTATCTTTATTCACTCTAGTTATGTGGACCTCAGCAATAACAATTTAAGTGGAACCATTCCTTCCCAAATTGGAAACCTTTCGTATTTAGACCCAAGTTTCAATAACCTTAGTATCAAAAACAGAAAGGAACTTAAGTCTATTCCAGTGTGCTATATGCATTGCAATCCCTGCCATGATCCACAAGACCATCATAATAAGCATTCTGGTCGATTAGAAGACCATCATAATAAGCATTCTGGTCGATCATTAATTTTGGTCATAATCGTGGTCTGCATTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGCATTTTCCATGCCAGGCATCATGGCAAGCCTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCAATTTGGAACTATGATGGCAAAATCGCATTTGAGGATATCATTGAAGCAACAGAGGACTTTGATATCAGATATTGCATTGGAACCGGCGCTTATGGTAGCGTCTATAAAGCGCAACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATGCATCATTTTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACCGCAACATCATTAGGCTTTATGGCTATTGTTTTCATAACCGATGTATGTTTTTGGTGTACGAATACTTAGAAAGAGGAAGCTTGTACTGTAACTTGGCGGACGAGATCGAAGCACAAGAGTTGAAGTGGAGCAAGAGGGTGAACATCATCAAAGGGACAGCTTATGCTCTTGTTCACATGCATCATCACTGCCCTTCTCCTATTGTTCATCGAGATGTCAGCAGCAACAATGTTCTGCTGAATTCAGACTTAGAAGCTTGTGTCTCAGATTTCGGTACAGCAAGACTTCTTGATCCTGATTCATCTAACCAAACTCTTTTAGTTGGCACTTATGGATATGTTGCTCCAGTGATCGCAGCTGTAGAAATAGAGTTAAGAAGCGAAGAGAGTAGCGGCCACAACAGAGAGCGGTCGGAGGTTCTGGAGGCCAGGGGCACCGATTCGGTCGGGGAGAAGCAGCTGCGAAGAACATTGTGGGGGATTCGGTTTTCTTTCAAATGGTCAGAATGGTGCTAA 1854 0.4067 MQLKFSVFPNLVRLDFSEMGLCEFPKLRGLKKLQHLNLSYNRFSGEAPLALLTNLTQLVVLDISNNQYISGPIPQELSKLQRLVTLDLNANVLSKGIPLILGQMSSLTHMKLSNNLLYGDLPFTLANLTQLLVLDLFQNKLSGFIPHEIGKLTNLLTLDMSSNSLSGPIPEQIGYLNHLTSLHLHSNLLSGSIPSNIGLLTRLEVLTIGSNMIDGCIPKEIEHLLHLKVLDLSYNAISGVIPSSIFIHSSYVDLSNNNLSGTIPSQIGNLSYLDPSFNNLSIKNRKELKSIPVCYMHCNPCHDPQDHHNKHSGRLEDHHNKHSGRSLILVIIVVCITISLGSVGIGICIFHARHHGKPENKATKNGDLFSIWNYDGKIAFEDIIEATEDFDIRYCIGTGAYGSVYKAQLPSGKTVALKKLHKTESENASFYKSFCNEVEVLTEIRHRNIIRLYGYCFHNRCMFLVYEYLERGSLYCNLADEIEAQELKWSKRVNIIKGTAYALVHMHHHCPSPIVHRDVSSNNVLLNSDLEACVSDFGTARLLDPDSSNQTLLVGTYGYVAPVIAAVEIELRSEESSGHNRERSEVLEARGTDSVGEKQLRRTLWGIRFSFKWSEWC 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02228 617 ProSiteProfiles Protein kinase domain profile. 390 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g02228 617 ProSitePatterns Protein kinases ATP-binding region signature. 396 418 IPR017441 GO:0005524
Adu02g02228 617 SUPERFAMILY L domain-like 5 300 - -
Adu02g02228 617 ProSitePatterns Tyrosine protein kinases specific active-site signature. 514 526 IPR008266 GO:0004672|GO:0006468
Adu02g02228 617 SUPERFAMILY Protein kinase-like (PK-like) 371 564 IPR011009 -
Adu02g02228 617 Pfam Leucine rich repeat 178 237 IPR001611 GO:0005515
Adu02g02228 617 ProSiteProfiles Leucine-rich repeat profile. 32 53 IPR001611 GO:0005515
Adu02g02228 617 Gene3D Ribonuclease Inhibitor 2 322 IPR032675 -
Adu02g02228 617 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 2 174 - -
Adu02g02228 617 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 163 565 - -
Adu02g02228 617 Gene3D Phosphorylase Kinase; domain 1 353 468 - -
Adu02g02228 617 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 174 - -
Adu02g02228 617 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 163 565 - -
Adu02g02228 617 Gene3D Transferase(Phosphotransferase) domain 1 469 588 - -
Adu02g02228 617 SMART LRR_typ_2 128 152 IPR003591 -
Adu02g02228 617 SMART LRR_typ_2 176 200 IPR003591 -
Adu02g02228 617 SMART LRR_typ_2 224 248 IPR003591 -
Adu02g02228 617 SMART LRR_typ_2 30 53 IPR003591 -
Adu02g02228 617 SMART LRR_typ_2 80 104 IPR003591 -
Adu02g02228 617 Pfam Protein kinase domain 395 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02228 Adu-Chr2 86821407 86825216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02228 2 562 Receptor kinase-like Gene Family AT4G08850 37.242 9.24e-112 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu02g02228 Pkinase 5.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02228 - - ahf:112728721 878.241