Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02224 ATGTCTTCTTTGGACCTCTCATCAAATAAATTAGGTGGCTCACTACCATCAAGTATTGCCAAAGCCATAAGCCTCTCATACATAGACCTCTCTCACAACCACTTGAAAGGTCCTATACCAACTCTTTTTCCTTATTGTGCTCTTAATGCAGCAATAGATTTATACCACAACATGTTACATGGAAGCATTACTTTCAAAATCGGTTGTGCTACCAATGTTGACCTTAGCCATAATTTTTTCAGTGGTGAGCTTCCATCTATTCATGGATTAGCTTCACAGCTAGAGAGTTTGGATCTTAGTTACAATAATTTTACAGGCAAATTGAACAAGGAACTTGCTGCTCTAAAGTTCATTAACCTGTCATATAATTCCTTTGACTTTTCACAAGATCATCATGACAAGCTCCTAGATTATTGTTCTTTCCAAAAAGACTCATTCATTGGATGTGGCTCTCTAAATTTTTCATCATGCCACTCTGTCCAACAAAGAAAGTCACCATCATCAAATAAAGCAAAGCACACAATTGACATAATTGAAGCAATACAAGACTTTGATATTAGATACTGCATTGGAACTGGTGCATATGGTAGTGTTTACCAAGCAAATTTGCCAAGTGGTAGAACTGTTGCATTGAAGAAACTTCATCAAAAGGAATCTCAGAACCCTTCATTTGACAAGAGTTTCCGCAATGAGTTTATGATGTCATCCCAAATCTGGCATAGAAACATTGTCAAGCTTTATGGCTATTGTCTTCACAACAGGTACATGTTTTTGATCTATGAATACATGGAAAGAGGAAGCTTATTTTGTGTGTTGAGCAATGATGTGGAAGCTAAGGAGTTGAATTGGAGGAAGAGGATGAATATCATTAAAGGAATAGCACATGCTTTGTGTTACATGAATCATGATTGTAAGCCACCAATTGTTCATAGAGATGTAACATGTAACAATGTTTTGTTGAACTCAAACTTGAGGCTTTTGTTTCGGATTTTGGCACTACTAGACTTCTTGATCCTGATTCTTCAAATCAAACATTGCTAG 1041 0.365 MSSLDLSSNKLGGSLPSSIAKAISLSYIDLSHNHLKGPIPTLFPYCALNAAIDLYHNMLHGSITFKIGCATNVDLSHNFFSGELPSIHGLASQLESLDLSYNNFTGKLNKELAALKFINLSYNSFDFSQDHHDKLLDYCSFQKDSFIGCGSLNFSSCHSVQQRKSPSSNKAKHTIDIIEAIQDFDIRYCIGTGAYGSVYQANLPSGRTVALKKLHQKESQNPSFDKSFRNEFMMSSQIWHRNIVKLYGYCLHNRYMFLIYEYMERGSLFCVLSNDVEAKELNWRKRMNIIKGIAHALCYMNHDCKPPIVHRDVTCNNVLLNSNLRLLFRILALLDFLILILQIKHC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02224 346 Gene3D Transferase(Phosphotransferase) domain 1 164 338 - -
Adu02g02224 346 SUPERFAMILY Protein kinase-like (PK-like) 165 326 IPR011009 -
Adu02g02224 346 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 325 - -
Adu02g02224 346 ProSitePatterns Tyrosine protein kinases specific active-site signature. 308 320 IPR008266 GO:0004672|GO:0006468
Adu02g02224 346 ProSitePatterns Protein kinases ATP-binding region signature. 190 212 IPR017441 GO:0005524
Adu02g02224 346 Pfam Protein kinase domain 189 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g02224 346 ProSiteProfiles Protein kinase domain profile. 184 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g02224 346 SUPERFAMILY L domain-like 3 128 - -
Adu02g02224 346 Gene3D Ribonuclease Inhibitor 1 163 IPR032675 -
Adu02g02224 346 Pfam Leucine Rich Repeat 93 113 IPR001611 GO:0005515
Adu02g02224 346 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 1 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02224 Adu-Chr2 86744953 86746147 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02224 1 323 Receptor kinase-like Gene Family AT4G08850 34.343 2.26e-58 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Adu02g02224 Pkinase 8.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02224 - - ahf:112728702 391.349