Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02201 ATGGCAACATCTAAGTTGCTATTAGCAACACTTGTAATAAGTGTACCTTTTCTATTTTGTTCTATAGCATATGGTTACTCATTGAAAGACATAAAAACATGGTGTAGCCAAACACCTTACCCTGGACCATGTGAGTACTATTTGAGCAACCATGCATACAACAAACCCATAAAGAACAAATCGGATTTCCTCAAAGTGTCACTACAATTAGCCATGGAGAGAGCACAAAAGGGTCATGAGAACACAATCTCACTTGGCCCTAAGTGTAGAAATGCACATGAAAAAGCTGCTTGGAATGATTGCATTAAACTCTATGAGTACACAATCAACAAGCTCAACAAAACCATGGATCCTAAAACAAAGTGTGACCAAGTTGATGCACAAACTTGGCTCAGCACTGCCCTAACAAATCTTGAGACATGCAAAGCCGGTTTCTACGACCTAGGAGTACAAGATTACATGCTACCATTGTTGTCCAACAACAATGTTTCATGTTTGCTAAGCAACACGCTGTCCTTGAACAAGGTGGCTTTTCAACCACCAAGTTATAAAGATGGTTTCCCAACATGGGTCAAGCCGGGTGACCGGAAACTTTTGCAGTCGTCTTCGGCGGCTTCTAAGGCTAATGTGGTGGTGGCCAAAGATGGGTCTGGAAAATACACCACCGTTAGTGCCGCCGTAAACGCTGCACCAAGTGGCAGCAGTAGGTATGTGATATATGTTAAGGCCGGTGTGTATAATGAACAAGTTCAGGTTAAAGCAAAGAATATTATGTTGGTCGGAGATGGTATTGGAAAAACCATAATCACAGGTAGCAAAAGTGTTGGAGCCATTACTGGAGATGGATTCATTGCTCAAGATATCACATCCAGAAACACTGCTGGAGCAGCAAATCATCAAGCTGTGGCACTACGTTCTGGATCAGATCTCTCAGTGTTCTACAGATGTGGATTTGAAGGTTATCAAGACACATTATATGTATACTCAGATAGACAATTCTACAGAGAATGTGACATTTATGGAACCGTTGATTTTATCTTTGGTAATGCGGCAACGGTTTTACAAAACTGTAACATTTATGCAAGAAACCCTCCTCAAAAGACAATCACAGTAACTGCTCAAGGTAGAACTGATCCAAACCAAAACACAGGAATCATCATCCACAATTCAAAGATCACAGCTGCCTCAGGCCTAAACCCTAGCTCAGTGAAATCATATCTTGGAAGGCCATGGAAGCAATACTCAAGAACCGTGGTGATGAAGACTTATCTTGATAGTTTGATTAACCCAGCAGGGTGGTTGGAATGGAGTGGTAACTTTGCATTGAACACTTTGTATTATGCTGAGTATGCAAATACAGGTCCTGGTTCTTCTACTTCAAATAGGGTTTCATGGAAGGGTTACCATGTCCTTACTAGTGCTTCTCAAGCTTCACCTTTCACTGTTGGAAACTTTCTTGCTGGAAATTCATGGTTGCCAAGCACTGGAGTCCCTTTTACCTCTGGTCTGTGA 1512 0.4167 MATSKLLLATLVISVPFLFCSIAYGYSLKDIKTWCSQTPYPGPCEYYLSNHAYNKPIKNKSDFLKVSLQLAMERAQKGHENTISLGPKCRNAHEKAAWNDCIKLYEYTINKLNKTMDPKTKCDQVDAQTWLSTALTNLETCKAGFYDLGVQDYMLPLLSNNNVSCLLSNTLSLNKVAFQPPSYKDGFPTWVKPGDRKLLQSSSAASKANVVVAKDGSGKYTTVSAAVNAAPSGSSRYVIYVKAGVYNEQVQVKAKNIMLVGDGIGKTIITGSKSVGAITGDGFIAQDITSRNTAGAANHQAVALRSGSDLSVFYRCGFEGYQDTLYVYSDRQFYRECDIYGTVDFIFGNAATVLQNCNIYARNPPQKTITVTAQGRTDPNQNTGIIIHNSKITAASGLNPSSVKSYLGRPWKQYSRTVVMKTYLDSLINPAGWLEWSGNFALNTLYYAEYANTGPGSSTSNRVSWKGYHVLTSASQASPFTVGNFLAGNSWLPSTGVPFTSGL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02201 503 CDD PMEI-like_3 33 175 - -
Adu02g02201 503 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 176 IPR035513 -
Adu02g02201 503 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 176 IPR035513 -
Adu02g02201 503 ProSitePatterns Pectinesterase signature 2. 339 348 IPR033131 -
Adu02g02201 503 SUPERFAMILY Pectin lyase-like 203 502 IPR011050 -
Adu02g02201 503 Pfam Pectinesterase 209 489 IPR000070 GO:0030599|GO:0042545
Adu02g02201 503 ProSitePatterns Pectinesterase signature 1. 233 252 IPR018040 -
Adu02g02201 503 Gene3D - 203 503 IPR012334 -
Adu02g02201 503 PANTHER PECTINESTERASE 6 502 - -
Adu02g02201 503 Pfam Plant invertase/pectin methylesterase inhibitor 30 173 IPR006501 GO:0004857
Adu02g02201 503 SMART PMEI_2 26 173 IPR006501 GO:0004857
Adu02g02201 503 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 176 IPR006501 GO:0004857
Adu02g02201 503 PANTHER PECTINESTERASE 6 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02201 Adu-Chr2 86423465 86427216 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02201 1 503 Carbohydrate Esterase AT2G45220 65.377 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02201 K01051 - gmx:100794948 820.076