Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02178 ATGAAGGCGATGCCCTTTCCTTCTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCTTCTTATTGTTCTGCAACAGATCTGTTCTCACTGCTTCACCATCAACAGCAACTTGTTAATAATCATAGTATCCATCAGCCACCACCACCATCACAAGAAGGAAAGTGGAGGAGAAGGGAAGAAGAAGAAGAAGAAGTAGAAGAAGAGAATAAAGGCTATGTGGGTTGCACTGAGCCCACATCTGTTCTTGACTCAAGAAGAAGCCAAAGCCCTCCTTCATCCACCTGCACAATGTCCTCTTCTCTTGGTAGCAGCAACAACAGCACAAGCAAAGGTAGTGCTGCTGGTGGTGGCTGCTCAGCCTCTGCTGCAGCACTAACCTCAGAGAATCCTCCTCCTCCTCCAGAAGGATCCATGGAGAAATGTGGTGGGGCAAGAATGATGGATGACTGGGAGGGTCAAGATCAGTCCATTCTGAGGCTAATCATGGGTGATGTTGAGGACCCTTCTGCTGGTTTGACCAAGCTCTTGCAAACTGGCTCTCGTAATGTTGATTTCGGTTCTTCAGGGTTTGGTGTTGTGGAGCAAGGAGGATTGGTTATGGACCCTTCTATGCCTGGGAATTACCCTGCTTTCCCATTCCTTGGGGCTGAGAATATCGAGAGTCACAATGCAAAGAATGGTTGTGGTGTTTCTGAACCCATGTTTGCTTCCGGTAACAATCCTATGTTGGTGTCCGCGGCTCCGACTTCGGGTGTGTTTGGCTTTCAGCAGCCTGTGTTTGGAACCGTGGATGAGAAGCCTCAGGTTATCAACCCTCAGTTTATGATGAATCATAATCAAGTTCAGTTTTCAGAGAATCCTTCATTCTTTGTGCCATTGACATACCCCCAAATGCAAGAGCAGCATATTGTTTACTCTCAGCAACCGGCGAAGCGTGCGGCGGTCGGGCACAATTATCAGGTGCCGAGATTACCCCTTTTGGATTCGGGGCAGGAGCAATTCGCCAGGAGGCAGCAACAGGTGCAGCTTCCATTGTTTCCTCATCATCTGCAGCATCAGCAGAAGGTGAGTTCAGCCGGAGACGAGGCAAGCAACCAGCTTCAGCAGACTATGTTTGATCAGCTATACAAGACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCTTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCCGTTGGCAAGCCTTTTCAGAGGGCTGCTCTCTACATGAAGGAGGCATTGCAACTACTGCTCCATTCAAACATTCCCAATTTCATGCCTTTCTCGCCCATCGGCTTCATATTCAAGATTGGAGCTTACAAATCATTCTCAGAGATCTCACCTGTTCTCCAGTTTGCAAACTTCACTTCCAATCAAGTCCTCATTGAAGCTGTAGAACGTTTCGATCGAATTCACATTATTGACTTTGATATTGGGTTTGGAGTGCAGTGGTCTTCCTTTATGCAAGAGCTTGCCTTGAGAAATAGCAATGCATCTTCTCTTAAAGTTACTGCCATAGTTTCGCCTTCGAATTGTGACGAGGTTGAGCTGAATTTCACAAGAGAGAATTTAAGTCAGTATGCAAAAGACATCAACTTATCATTCGAGCTCAATATCTTGAACATTGAATCATTGAGCTCCTCTTCCTTTCCACTGGCAAGTCAGTTCTTCGATAGCGAGGCAGTTGCTGTAAATATGCCGCTTTCTTGTTTCACTCATCATCCGTCGCTGGTTCCATCGGTCCTTCATTTTGTCAAGCAGCTTAGGCCAAAAGTGGTGGTTACTTTGGACCGGAATTGTGACCGAATCGATGTGCCACTTCCAACCAAAGTAGTCCATGTTCTTCAATATTACTCAGCCTTGCTCGAATCGCTTGACGCCGTGAATGTGAACCTCGACGTCCTCCAAAAGATCGAGAAGCATTTCATCCAACCATCCATTAGGAATGTGATCACAGGTCACCACCATTACCATTCACAAGAGAAGCTACCTCATTGGAGGAACCTCTTTGTTCAATCTGGATTCTCATCATTCACATTCAGTAACTTCACAGAAGCTCAAGCAGAATGTCTGGTGCAGCGTGCGCCGGTGCGAGGGTTTCAGGTCGAGAGAAACCATTCCTCTCTTGTTCTATGCTGGCAGCGAAAAGACCTGGTCTCCATTTCGAGTTGGAGATGCTAA 2202 0.47 MKAMPFPSEEFQGKGVLDFSSSYCSATDLFSLLHHQQQLVNNHSIHQPPPPSQEGKWRRREEEEEEVEEENKGYVGCTEPTSVLDSRRSQSPPSSTCTMSSSLGSSNNSTSKGSAAGGGCSASAAALTSENPPPPPEGSMEKCGGARMMDDWEGQDQSILRLIMGDVEDPSAGLTKLLQTGSRNVDFGSSGFGVVEQGGLVMDPSMPGNYPAFPFLGAENIESHNAKNGCGVSEPMFASGNNPMLVSAAPTSGVFGFQQPVFGTVDEKPQVINPQFMMNHNQVQFSENPSFFVPLTYPQMQEQHIVYSQQPAKRAAVGHNYQVPRLPLLDSGQEQFARRQQQVQLPLFPHHLQHQQKVSSAGDEASNQLQQTMFDQLYKTAELIEAGNPVLAQGILARLNHQLSPVGKPFQRAALYMKEALQLLLHSNIPNFMPFSPIGFIFKIGAYKSFSEISPVLQFANFTSNQVLIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSNASSLKVTAIVSPSNCDEVELNFTRENLSQYAKDINLSFELNILNIESLSSSSFPLASQFFDSEAVAVNMPLSCFTHHPSLVPSVLHFVKQLRPKVVVTLDRNCDRIDVPLPTKVVHVLQYYSALLESLDAVNVNLDVLQKIEKHFIQPSIRNVITGHHHYHSQEKLPHWRNLFVQSGFSSFTFSNFTEAQAECLVQRAPVRGFQVERNHSSLVLCWQRKDLVSISSWRC 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02178 733 Pfam GRAS domain family 375 732 IPR005202 -
Adu02g02178 733 ProSiteProfiles GRAS family profile. 364 732 IPR005202 -
Adu02g02178 733 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 71 732 IPR005202 -
Adu02g02178 733 MobiDBLite consensus disorder prediction 42 147 - -
Adu02g02178 733 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 71 732 - -
Adu02g02178 733 MobiDBLite consensus disorder prediction 82 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02178 Adu-Chr2 86023117 86025807 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02178 375 733 GRAS Transcription Factor Family AT4G00150 54.294 6.21e-124 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu02g02178 GRAS 5.8e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02178 - - aip:107625898 1211.44