Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu02g02162 | ATGGAGAAGCACAAATGCAAGTTATGCTTCAGAAACTTCTCTAATGGAAGAGCTTTGGGGGGACACATGAGGTCTCACATGATGAACCTCCACGTCCCTCCAAAGCCGAACGAATCGCCGCCGCCGTCGCCGCCTGCAATTCAACTCAGCTTCGAGGCTGAGTCGTCAACTCCGCTCTCACCATCGGCGTCGTCGTCATCTTATTTCGGAAAAGAAGACGATACGAGCTTGTACTATGGCCTCAGGGAGAATCCAAAGAGAAGCTTCAGGATCGCGGATCCTGAGTTCTCGTTCGTGGCTGCCGGAGACACCGGATCGGTTATACTCCAAGAAGATCGAGAGAGCGAAACGGAGTCTTCAAAGAACGTAACGAAGAAAAGATCCAAAAGAGCGTGGAAACTCGGCGGCGGCGGTGATGATTTCAATAGCAAGAAGGTGAAACTGAGCCAACTCGGTAACGGCAACAACAAGAACGAGTCAGCGAGTTCGGCTTCTGATGCAACCACCGAAGAAGACATCGCATTATGGCTCATGATGCTGTCACGTGACACTGGTAACAATTGGAAGATTAATCACAAGATCAACATAAACATAGAAGAACAAGAACTGGAAGAAGAAGATTATGACGAAGAGGACGAAGACGAAGAGGAGGAAGAAGAGGACGAAGGCGAAGAGAGTGATGAGTATGAGGTTGTGAAGAACAAAGCGAAGTCGAATAAGGTGAGAGGAGGAAGGTACAAATGCGAGACGTGCAACAAAGTTTTTAGGTCTTATCAAGCATTGGGTGGCCATAGAGCGAGTCATAAGAAGATGAAGATGGATTACAACAATCATAATGATTCTGAATTCATGGTGGTAGAGGATCACGCTGATGAGAATGTTAACAACAATAACAATGAAGTTTTTGCTTCTTCTGCTTTGGCTTCCGTAGAAAACGGTAACAACAACAATGGTGGCAATAACAATAACAAGAAGATCCATGAATGTCCCGTTTGTTTTCGAGTTTTCGCCTCCGGTCAAGCTCTCGGTGGACATAAGAGAACTCATGTTACTACTGTCTCTACTCCCACTATCACTACTAGAGCAATAGCAGAAGTAAAAGCAGAAGCAGAAGCAATCGCGGCCTCAAAGGCCGCGGTTGCCACCGCTAGTTCCTCAAAGCTTGGAAGAGAGAGTTTCATAGATCTTAACCTCCCTGCCCCAGCCGAAGAAGATGATGCGAGCCAATTCGAGGATTCCGCGGTTTCGGATGCAGAGTTTGTGAATCCGGTGAAGGTTTTTCCTAGATGA | 1290 | 0.469 | MEKHKCKLCFRNFSNGRALGGHMRSHMMNLHVPPKPNESPPPSPPAIQLSFEAESSTPLSPSASSSSYFGKEDDTSLYYGLRENPKRSFRIADPEFSFVAAGDTGSVILQEDRESETESSKNVTKKRSKRAWKLGGGGDDFNSKKVKLSQLGNGNNKNESASSASDATTEEDIALWLMMLSRDTGNNWKINHKININIEEQELEEEDYDEEDEDEEEEEEDEGEESDEYEVVKNKAKSNKVRGGRYKCETCNKVFRSYQALGGHRASHKKMKMDYNNHNDSEFMVVEDHADENVNNNNNEVFASSALASVENGNNNNGGNNNNKKIHECPVCFRVFASGQALGGHKRTHVTTVSTPTITTRAIAEVKAEAEAIAASKAAVATASSSKLGRESFIDLNLPAPAEEDDASQFEDSAVSDAEFVNPVKVFPR | 429 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu02g02162 | 429 | SUPERFAMILY | beta-beta-alpha zinc fingers | 245 | 349 | IPR036236 | - | |
Adu02g02162 | 429 | MobiDBLite | consensus disorder prediction | 146 | 168 | - | - | |
Adu02g02162 | 429 | PANTHER | CYS2/HIS2 ZINC-FINGER TRANSCRIPTION FACTOR | 1 | 422 | - | - | |
Adu02g02162 | 429 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 329 | 349 | IPR013087 | - | |
Adu02g02162 | 429 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 4 | 36 | IPR013087 | - | |
Adu02g02162 | 429 | SMART | c2h2final6 | 4 | 26 | IPR013087 | - | |
Adu02g02162 | 429 | SMART | c2h2final6 | 246 | 268 | IPR013087 | - | |
Adu02g02162 | 429 | SMART | c2h2final6 | 327 | 349 | IPR013087 | - | |
Adu02g02162 | 429 | Gene3D | Classic Zinc Finger | 243 | 349 | - | - | |
Adu02g02162 | 429 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 327 | 349 | IPR013087 | - | |
Adu02g02162 | 429 | PANTHER | ZINC FINGER PROTEIN ZAT1-RELATED | 1 | 422 | IPR044303 | GO:0006355 | |
Adu02g02162 | 429 | Coils | Coil | 191 | 221 | - | - | |
Adu02g02162 | 429 | MobiDBLite | consensus disorder prediction | 109 | 168 | - | - | |
Adu02g02162 | 429 | MobiDBLite | consensus disorder prediction | 200 | 227 | - | - | |
Adu02g02162 | 429 | MobiDBLite | consensus disorder prediction | 27 | 70 | - | - | |
Adu02g02162 | 429 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 26 | IPR013087 | - | |
Adu02g02162 | 429 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 246 | 273 | IPR013087 | - | |
Adu02g02162 | 429 | MobiDBLite | consensus disorder prediction | 200 | 236 | - | - | |
Adu02g02162 | 429 | MobiDBLite | consensus disorder prediction | 49 | 70 | - | - | |
Adu02g02162 | 429 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 248 | 268 | IPR013087 | - | |
Adu02g02162 | 429 | MobiDBLite | consensus disorder prediction | 109 | 125 | - | - | |
Adu02g02162 | 429 | Pfam | C2H2-type zinc finger | 245 | 270 | - | - | |
Adu02g02162 | 429 | Pfam | C2H2-type zinc finger | 4 | 27 | - | - | |
Adu02g02162 | 429 | Pfam | C2H2-type zinc finger | 327 | 349 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu02g02162 | Adu-Chr2 | 85562732 | 85564450 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu02g02162 | 1 | 408 | C2H2 Transcription Factor Family | AT3G60580 | 39.423 | 2.72e-59 | 193 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Adu02g02162 | zf-C2H2_6 | 1.7e-11 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu02g02162 | - | - | adu:107475462 | 660.603 |