Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02157 ATGAGACATTACTACAGCTGCAAAATCTATCATCAATTCATCATGAAGGTTCACACATGTACTCTTGTAGTCCTTTGTTCTATGCTTTTAAGCACTACTTGTTATTGCATCAACCCCAAATTTTTCAATCCTTCCAAAGCTGCAAATGATGAGAAACTATGGAACCAAACACGAGCTACATGGTATGGAACCCCGGATGGTGCTGGATCAGATAGTGGTGCATGTAATTATGGTAAAACTGTGGAGAGTCCTCCAATCTCTAAATTGACCGCGGCTGCTGGTAGTTTTATTTTTCGCAAAGGCTATGGATGTGGTTCTTGTTATGAGGTGAAATGCACAGATAATGCAGCATGTTCAGGGAAGCCAGTGACAGTGGTAGTAAGTGATGAATGCTCATCGTGTTCAGGATACCATTTCAATCTCAGTGGCGCCGCTTTTGCTTCCATCGCAAATCCAGGTCAACAAGATACTCTTCGCAAACTTGGACAAGTCAACCTTCAATACAGAAGGGTTTCATGCTCATTTGGGAATTCTATAGCAGTGAGGATCGGTGAAAACTCTAGACCACCAACTTACATGGAAGCATCAATCGAATACGTAAATGGAGACGCAGAATACATTGATTTAGAAGTTCGTGATCAAAGTTTTCTTACTGTTTCTCGTGTGGGGGGTGCAACATGGAGTTTCTTTTTCGCTGGTTATAATTTGCAACCTCCAATGACTTTAACGCTCACTCAACGTTATTCCAATGGCACCAAAGGAAAGACCATTCAACTTCCTAATATCATCCCAGTTGATTGGAAGATTGGTCAACTTTATCAATCAAAGACAAATTTCTAG 840 0.4095 MRHYYSCKIYHQFIMKVHTCTLVVLCSMLLSTTCYCINPKFFNPSKAANDEKLWNQTRATWYGTPDGAGSDSGACNYGKTVESPPISKLTAAAGSFIFRKGYGCGSCYEVKCTDNAACSGKPVTVVVSDECSSCSGYHFNLSGAAFASIANPGQQDTLRKLGQVNLQYRRVSCSFGNSIAVRIGENSRPPTYMEASIEYVNGDAEYIDLEVRDQSFLTVSRVGGATWSFFFAGYNLQPPMTLTLTQRYSNGTKGKTIQLPNIIPVDWKIGQLYQSKTNF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02157 279 Gene3D - 177 279 IPR036749 -
Adu02g02157 279 PANTHER EXPANSIN-LIKE PROTEIN B1 19 279 - -
Adu02g02157 279 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 191 275 IPR007117 -
Adu02g02157 279 SMART dpbb_1 90 168 IPR007112 -
Adu02g02157 279 Pfam Expansin C-terminal domain 179 264 IPR007117 -
Adu02g02157 279 Gene3D - 39 174 IPR036908 -
Adu02g02157 279 PRINTS Expansin/Lol pI family signature 94 112 IPR007118 GO:0005576
Adu02g02157 279 PRINTS Expansin/Lol pI family signature 261 275 IPR007118 GO:0005576
Adu02g02157 279 PRINTS Expansin/Lol pI family signature 53 68 IPR007118 GO:0005576
Adu02g02157 279 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Adu02g02157 279 PRINTS Expansin/Lol pI family signature 161 177 IPR007118 GO:0005576
Adu02g02157 279 SUPERFAMILY Barwin-like endoglucanases 54 175 IPR036908 -
Adu02g02157 279 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 72 178 IPR007112 -
Adu02g02157 279 PANTHER EXPANSIN-B3 19 279 - -
Adu02g02157 279 Pfam Lytic transglycolase 93 167 IPR009009 -
Adu02g02157 279 PRINTS Major pollen allergen Lol pI signature 150 165 IPR005795 GO:0005576|GO:0019953
Adu02g02157 279 PRINTS Major pollen allergen Lol pI signature 198 213 IPR005795 GO:0005576|GO:0019953
Adu02g02157 279 PRINTS Major pollen allergen Lol pI signature 92 103 IPR005795 GO:0005576|GO:0019953
Adu02g02157 279 PRINTS Major pollen allergen Lol pI signature 112 122 IPR005795 GO:0005576|GO:0019953
Adu02g02157 279 PRINTS Major pollen allergen Lol pI signature 251 268 IPR005795 GO:0005576|GO:0019953
Adu02g02157 279 SUPERFAMILY PHL pollen allergen 178 275 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02157 Adu-Chr2 85485282 85488454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02157 35 279 Expansin Gene Family AT1G65680 38.492 1.10e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02157 - - ahf:112728471 406.371