Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02154 ATGCTTTTAAGCACTACTTGCTATTGCATCAACCCCAAATTTTTCAACCCTTCAAAGGTTCCAAATGATGAAAAACCATGGGACCAAACACAAGCTACATGGTATGGAACCCCCGACGGAGCTGGATCAGAGAGTGGTGCATGTAAATATGGTAAAACTGTGGAGAATCCTCCCATCTCTAAATTGACGGCGGCTGTTGGCCATTATATTTTCCGCCAGGGCTACGGATGTGGTGCTTGTTATGAGGTACATTTATGTGTAGGTGGTGCATGTAAATATGGTAAAACTGTGGAGAATCCTCCCATCCCTTCCCTTGATTCCTTCAAAGCTCCAGTTAGCATATACTGCAAAAGCAGTTGTCACCTGTCAATTACATAA 378 0.4339 MLLSTTCYCINPKFFNPSKVPNDEKPWDQTQATWYGTPDGAGSESGACKYGKTVENPPISKLTAAVGHYIFRQGYGCGACYEVHLCVGGACKYGKTVENPPIPSLDSFKAPVSIYCKSSCHLSIT 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02154 125 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Adu02g02154 125 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Adu02g02154 125 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Adu02g02154 125 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 125 IPR007112 -
Adu02g02154 125 Gene3D - 13 98 IPR036908 -
Adu02g02154 125 PANTHER EXPANSIN-LIKE PROTEIN B1 2 84 - -
Adu02g02154 125 PANTHER EXPANSIN-B3 2 84 - -
Adu02g02154 125 SUPERFAMILY Barwin-like endoglucanases 26 89 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02154 Adu-Chr2 85425815 85427129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02154 8 91 Expansin Gene Family AT1G65680 45.238 2.45e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02154 - - adu:107475617 189.889