Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02153 ATGCTTTTAAGCACTACTTGCTATTGCATCAACCCCAAATTTTTCAACCCTTCAAAGGTTCCAAATGATGAAAAACCATGGGACCAAACACAAGCTACATGGTATGGAACCCCCGACGGAGCTGGATCAGAGAGTGGTGCATGTAAATATGGTAAAACTGTGGAGAATCCTCCCATCTCTAAATTGACGGCGGCTGTTGGCCATTATATTTTCCGCCAGGGCTACGGATGTGGTGCTTGTTATGAGGTGAAATGCACAGATAATCCAGCATGTTCAGGGAAGCCAGTGACAGTGGTGGTAAGTGATGAATGCCCATCGTGTTCAGGATACCATTTCAATCTCAGTGGCGCCGCTTTTGCTTCCATCGCAAATCCAGGTCAACAAGATACTCTTCGCAAACTTGGACAAGTCAACCTTCAATACAGAAGGAGGAGCAACCTAATCCAGGACCTGCTGCAAAGGAAGAGAAGCATGAACGAGGACCATCTCGTTCGAGCTAGTCTTCCGACGCTGATGGAGGAGCCAACTCCATCCCGTCATGCTTGCCTTCTAGATTTGAACGTGCTAGCCTTCCAGATCCAGTCGTGCTCACGTTCCTGTGCTGGTTGTGACGCTCGTCTTCCAGTTTCGATCTTCGCGCTTGCCTTCTAG 651 0.4839 MLLSTTCYCINPKFFNPSKVPNDEKPWDQTQATWYGTPDGAGSESGACKYGKTVENPPISKLTAAVGHYIFRQGYGCGACYEVKCTDNPACSGKPVTVVVSDECPSCSGYHFNLSGAAFASIANPGQQDTLRKLGQVNLQYRRRSNLIQDLLQRKRSMNEDHLVRASLPTLMEEPTPSRHACLLDLNVLAFQIQSCSRSCAGCDARLPVSIFALAF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02153 216 Pfam Lytic transglycolase 64 140 IPR009009 -
Adu02g02153 216 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 143 IPR007112 -
Adu02g02153 216 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Adu02g02153 216 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Adu02g02153 216 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Adu02g02153 216 SMART dpbb_1 63 141 IPR007112 -
Adu02g02153 216 PANTHER EXPANSIN-LIKE PROTEIN B1 2 144 - -
Adu02g02153 216 Gene3D - 14 145 IPR036908 -
Adu02g02153 216 PANTHER EXPANSIN-B3 2 144 - -
Adu02g02153 216 SUPERFAMILY Barwin-like endoglucanases 26 143 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02153 Adu-Chr2 85416489 85420243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02153 8 143 Expansin Gene Family AT1G65680 47.826 1.13e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02153 - - adu:107475617 312.383