Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02137 ATGGAGTCAAGGAGCTGCATGAACGTGGTATGCGCCACCTTGACGTCGATTCAGTGGCGCAAAGGTTGGGCCTTGCGATCCGGCGAATTTGCCGATCTCTGTGATAAGTGCGGTTCTGCATATGAGCAATCAATATTTTGTGAAAAATTCCACTCAAATGATTCTGGTTGGAGAGAGTGTGTTTCATGTGGCAAGCGTCTACATTGTGGATGCATTGCCTCTAAGTCTCAGCTTGAGTTGCTAGATTCCGGTGGTGTAAGCTGTATAAATTGCACAAGAAATTCAGGACATAAACTTGTTGCGGGTACTGAAAAGCCTACTGGCTCTGGGGCATCAAAGATAAAGAACGTCAGTGAACAACTGTGTCCATCTCTGGCTAACCAATTAAACGTCAGGGGTATGCAAGTAGGACATTCCACAGATAGTGATGGGCTGAGATGGTGGCTTAAACCTCATAATCCTGATGCAAATGTCCCTTTTCCAGAGATAAAAACAGAGGAAGGTTTGCCTTCTACTGCAGAACTTGGAAGCCAATTGATATCACAATTTCACTGCAAATCTAATGGTTCATCTAGGGTTGCCAAATCAGACAACTGCCAGGCAGATATGGAGATGCAAGATATATATGAATCATTGGCACATGCAAATTTGAGTATGACTCTTGCTTCTCCTTCAGGAAATTCAAATCCATTTCATAGTGCCATTGCTGATGAAAGGGAACAAAGTAAAACCTCGCCTCCACTTTTACTTGGGTCTAGGTCTCGCCACCTTTTACCAAAGCCTCCTAGGTCAAGCCTTGGTTCAAGCTTAGAAACAAATGCAGCTATGGTGTCCCAAATCCGTGTAGCAAGGCCTCCTGCTGAGGGACGTGGAAGAAATCAGCTACTTCCCCGTTACTGGCCTAGGATTACAGATCAAGAGTTGCAACAAATATCAGGAGATTCAAATTCCACCATTGTGCCACTCTTTGAGAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTAGTTTTACCAAAAGCATGTGCTGAAGCATATTTCCCTCCTATCTCTCAACCAGAGGGCCTTCCTCTACGAATCCAAGATGTGAAAGGAAAAGAATGGGTGTTCCAGTTTAGATTTTGGCCAAATAATAACAGCAGGATGTATGTTCTAGAAGGCGTAACTCCTTGTATTCAGTCTATGCAACTGCAAGCTGGAGATACTGTAACTTTTAGCCGGATGGACCCTGAAGGGAAACTTATTATGGGGTTTAGGAAGGCAACAAATTCTGCTGCAGTACAGCAGGAATCTCATCCGTCTAATATGCCCAATGGCTCTTATTCAAGTGAAACTTCCTATTCTGGTGTTTATGAGAATCTACCTATATTAAGTGGTTATTCTGGCCTTCTCCAGTCACAAAAGGGAAGTTCAGAATCCCCGCTAAATACGCTGTCTAAAAAATGGAATTCAGCTGGTGGTGACATGAATTGGCATAATATTGAAATTCCTGAAAAAAGGACAAGGGAGGGATCGCTTTTGCCGGCTGTGCTGGTTCCAGAGAAGAAAAAAACCAGGAATATTGGGTCAAAAAGTAAGAGGTTGCTTATTGATAGCCAGGATGCGCTGGAGTTGAAGCTTACATGGGAAGAGGCACAGGATTTGCTTCGTCCTCCTCCAACTGCTAAACCAAGCATTGTCATGATTGAGGATCATGTATTTGAAGAATATGAAGAACCTCCTGTCTTTGGAAAGAAGAGTATATTCGTAGCCCGCTCTGCTGGGATAAATGAGCAGTGGACACAGTGTGATAATTGCTCAAAATGGAGGAAGTTACCAGTTGATGTACTTGTTCCCCCTAAGTGGACATGTGCTGATAATTTGTGGGATCAGAGCAGGCGTGCATGTTCTGCTCCAGACGAATTGAGCCCAAGGGAGATGGATAATCTCTTGCGACTGATCAAGGAATTCAAGAAACAGCGAATGACTGCCAGCCAAAGACCAACCCTAGAACATGAATCTTCCGGATTGGATGCTTTGGCAAATGCTGCAATACTTGGAGATGATGCAGGTGACCCTAGCAGAGCACCAGTTGCTACCACTACGAAGCACCCTCGGCATAGACCTGGTTGTTCCTGTATTGTATGTATCCAACCACCTAGTGGGAAGGGCAAGCACAAACCTACATGCACCTGTAACGTGTGCATGACAGTCAAACGTAGGTTTAAAACCCTTATGATGCGAAAGAAGAAGCGGCAATCTGAGCGTGAAGCAGAGATTGCTCAGAGAAATCAGCAGTCATGGGTGACCAAGGATGAATCTGAAGTAGAAAGCACCTCTCAGCATTTAACTCGAGGTGATGGTTTGGAGAATGAAGCAAGGGTGCCAAACGAGTTAGATTCAAGGAGTCAAGACCATGCGGATGATGCAGCCAAGGGACACTTAGATTTGAACTGCCAACCTGATCGAGAAGATGCTCAAGCTGGGACAAACAGCATGAGCATGATGAGTCTTCTTGAAGAAGCAAATCTGCCATTGGAGACCTACCTGAAGAAAAATGGTCTTACTAGCTTGATGTCAGAACAGGAAACAAATTCAGCCTCAAATATGCAGGCACAGACGACCAATGACAGTGAGGGAAAACAAAATGAGGATTGTTGTACTCCTTCTGCTGTTCAGGAGCAGGAAAGCAGTCCCGAAGAGAGCACGAAAGCAGTGAAAATTCAGAATGTTGACACCACATTTCTTTGGAACGGCAGCAGCATTGACAGTGTTAAAGATAGAGTAAGGGACTCCGCAAATGGAGCTCTTACTGCAGTAGCGTATAGCTTGGCGGTCTGGGGTGTCCGATGCTGTATGTTGCAGCACTCGAGGCACGGTCTCCCCGCCATTTGTAATTTCGCCAAATGGCAGTCACTTCTGCCTCTGAGTGCTGACCGCATAGCATACTATTCTCACCACAACACTGCTATCAACCATGGTTGA 2970 0.4508 MESRSCMNVVCATLTSIQWRKGWALRSGEFADLCDKCGSAYEQSIFCEKFHSNDSGWRECVSCGKRLHCGCIASKSQLELLDSGGVSCINCTRNSGHKLVAGTEKPTGSGASKIKNVSEQLCPSLANQLNVRGMQVGHSTDSDGLRWWLKPHNPDANVPFPEIKTEEGLPSTAELGSQLISQFHCKSNGSSRVAKSDNCQADMEMQDIYESLAHANLSMTLASPSGNSNPFHSAIADEREQSKTSPPLLLGSRSRHLLPKPPRSSLGSSLETNAAMVSQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKATNSAAVQQESHPSNMPNGSYSSETSYSGVYENLPILSGYSGLLQSQKGSSESPLNTLSKKWNSAGGDMNWHNIEIPEKRTREGSLLPAVLVPEKKKTRNIGSKSKRLLIDSQDALELKLTWEEAQDLLRPPPTAKPSIVMIEDHVFEEYEEPPVFGKKSIFVARSAGINEQWTQCDNCSKWRKLPVDVLVPPKWTCADNLWDQSRRACSAPDELSPREMDNLLRLIKEFKKQRMTASQRPTLEHESSGLDALANAAILGDDAGDPSRAPVATTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNQQSWVTKDESEVESTSQHLTRGDGLENEARVPNELDSRSQDHADDAAKGHLDLNCQPDREDAQAGTNSMSMMSLLEEANLPLETYLKKNGLTSLMSEQETNSASNMQAQTTNDSEGKQNEDCCTPSAVQEQESSPEESTKAVKIQNVDTTFLWNGSSIDSVKDRVRDSANGALTAVAYSLAVWGVRCCMLQHSRHGLPAICNFAKWQSLLPLSADRIAYYSHHNTAINHG 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02137 989 ProSiteProfiles B3 DNA-binding domain profile. 323 424 IPR003340 GO:0003677
Adu02g02137 989 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 861 - -
Adu02g02137 989 MobiDBLite consensus disorder prediction 741 788 - -
Adu02g02137 989 MobiDBLite consensus disorder prediction 683 703 - -
Adu02g02137 989 ProSiteProfiles Zinc finger CW-type profile. 589 639 IPR011124 GO:0008270
Adu02g02137 989 Pfam CW-type Zinc Finger 594 636 IPR011124 GO:0008270
Adu02g02137 989 Gene3D - 301 428 IPR015300 -
Adu02g02137 989 SMART B3_2 323 423 IPR003340 GO:0003677
Adu02g02137 989 Coils Coil 642 662 - -
Adu02g02137 989 MobiDBLite consensus disorder prediction 856 900 - -
Adu02g02137 989 MobiDBLite consensus disorder prediction 755 769 - -
Adu02g02137 989 Gene3D - 592 648 - -
Adu02g02137 989 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 3 861 - -
Adu02g02137 989 Pfam B3 DNA binding domain 323 422 IPR003340 GO:0003677
Adu02g02137 989 MobiDBLite consensus disorder prediction 238 268 - -
Adu02g02137 989 CDD B3_DNA 321 422 IPR003340 GO:0003677
Adu02g02137 989 SUPERFAMILY DNA-binding pseudobarrel domain 320 422 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02137 Adu-Chr2 85098043 85106496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02137 1 860 B3 DNA Binding Superfamily AT4G32010 50.347 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu02g02137 B3 2.6e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02137 - - gmx:100778833 1518.83