Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02129 AACACGTGACCATGATTCACCAGATGATAAATCCAAATGGGAATGCGTGAGGAAAGGGGTTTGCTGCATTTGCTGCGAAAGCAATATTGATTCTCTCTTGTACAGATGTGGGCACATGTGCACATGTTCTAACTGTGCTAATGATTTGCACCGAAGTGGAAGGAAGTGTCCAATGTGTCAAGCACCAGTTGTTGAAGTAATTCGTGCTTATTCTATATTATAG 223 0.417 TRDHDSPDDKSKWECVRKGVCCICCESNIDSLLYRCGHMCTCSNCANDLHRSGRKCPMCQAPVVEVIRAYSIL 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02129 73 SUPERFAMILY RING/U-box 20 66 - -
Adu02g02129 73 PANTHER PROTEIN, PUTATIVE-RELATED 2 72 - -
Adu02g02129 73 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 71 IPR013083 -
Adu02g02129 73 ProSiteProfiles Zinc finger RING-type profile. 21 60 IPR001841 -
Adu02g02129 73 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 72 - -
Adu02g02129 73 Pfam Zinc finger, C3HC4 type (RING finger) 19 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02129 Adu-Chr2 85046771 85047091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02129 21 67 C3H Transcription Factor Family AT3G06140 38.298 2.87e-09 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02129 - - ahf:112730063 167.548