Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02073 ATGAAATCAAGCACACCATTGAAAGCCTTGAGTGGTAATAGTAGTAGTAGTAGTGTTCATCATGACAATGATATTATTCCATTTCTTCATCATGAGTATGGTGGTAACATGATGAATAAGGTTACTACTAGTTATAGTTTTAATAACCCTTCTATGTGTCGATTAGGGCTTCCTTTAACAGCCATAGATAGGTTCTTATGTAGCCAACAACAAAGCCAAGTCCCTCATAGGAAACACCAACAACACAATGATGATGATGTTGCAAAGAATAATAATGTTAGTGTTTTTGATGAAGATTTCCACACTAGGTTTTCTAATTGTTATTATGGTGGTGCTTCAAATAACCCTTATTATAAGTTTGAGTGGCCTAATTGCACTACTCAAGAAGCAAGCCTTGTTGTTGATGATGATCATGATCATCACCTCTTAGCAATTAGTAGTGATGATCAAGAAGAGGATTTCAATTGGCTACAAAAATTCCTCACATTGTGTCACAATAAAGAAGATGTTCAAGCTTTAGGGGAAAATCTCAAAATTAGGGGAAGGAACCCTAAGAAAATTTCTTCTATATCCTTGATCAAAGGACAATGGACTCCTGAGGAAGACAGGAAATTGGAGAAGCTAGTGAAGCAACATGGTATAAGGAAGTGGTCACAAATAGCTGAGAAATTGGAGGGAAGGGTTGGGAAGCAGTGTAGAGAGAGGTGGCATAATCATCTCCGCCCTGATATTAAGAAAGATGGTTGGAGTGAAGAAGAAGAGAGGATTTTGGTAGAAACTCACATGAAGGTCGGAAACCGTTGGGCCGAAATCGCGAAGCGAATAGCAGGACGAACCGAAAACTCGATAAAAAATCATTGGAACGCAACAAAAAGAAGACAAAACTCAAGGAGAAAGAACAAGAAGCCATCATCATCATCAACCACCTCAAACAATAATGGCAAACCCCAATCTTCAATTCTTGAAGACTACATTAGAAGCAAAACCCTAATTGGTACCAATAATATCACTGCTCCTATTACTACTACCACTACTAATTCAACACCAACTATTACTAGTGAATCTGAATCTATCACTAATAATAGTGATAATAATAATAATCCATATTATTCATCTCCAACAATCATAGCTGAATCATCATATGATGATGAGTTACTCTTCATGCAACAACTTTTCAAAGAGAATAACCAAATTGTCAATGGAGATGCTGTTATTAAGAACCTTTACGATGAATGTGGTGATGGGTTTGTTCATTATTCCAATTATTATTATCCTCCAAATCCAGGGAACATGCACAACTCCATCATCAATTGA 1314 0.3668 MKSSTPLKALSGNSSSSSVHHDNDIIPFLHHEYGGNMMNKVTTSYSFNNPSMCRLGLPLTAIDRFLCSQQQSQVPHRKHQQHNDDDVAKNNNVSVFDEDFHTRFSNCYYGGASNNPYYKFEWPNCTTQEASLVVDDDHDHHLLAISSDDQEEDFNWLQKFLTLCHNKEDVQALGENLKIRGRNPKKISSISLIKGQWTPEEDRKLEKLVKQHGIRKWSQIAEKLEGRVGKQCRERWHNHLRPDIKKDGWSEEEERILVETHMKVGNRWAEIAKRIAGRTENSIKNHWNATKRRQNSRRKNKKPSSSSTTSNNNGKPQSSILEDYIRSKTLIGTNNITAPITTTTTNSTPTITSESESITNNSDNNNNPYYSSPTIIAESSYDDELLFMQQLFKENNQIVNGDAVIKNLYDECGDGFVHYSNYYYPPNPGNMHNSIIN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02073 437 Pfam Myb-like DNA-binding domain 197 254 - -
Adu02g02073 437 MobiDBLite consensus disorder prediction 1 20 - -
Adu02g02073 437 ProSiteProfiles Myb-like domain profile. 189 240 IPR001005 -
Adu02g02073 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 245 295 IPR017930 -
Adu02g02073 437 MobiDBLite consensus disorder prediction 341 366 - -
Adu02g02073 437 CDD SANT 249 291 IPR001005 -
Adu02g02073 437 SUPERFAMILY Homeodomain-like 191 287 IPR009057 -
Adu02g02073 437 ProSiteProfiles Myb-like domain profile. 241 291 IPR001005 -
Adu02g02073 437 PANTHER MYB DOMAIN PROTEIN 64-RELATED 188 394 - -
Adu02g02073 437 Gene3D - 248 319 - -
Adu02g02073 437 SMART sant 193 242 IPR001005 -
Adu02g02073 437 SMART sant 245 293 IPR001005 -
Adu02g02073 437 MobiDBLite consensus disorder prediction 301 320 - -
Adu02g02073 437 Gene3D - 193 245 - -
Adu02g02073 437 PANTHER MYB PROTEIN-RELATED 188 394 - -
Adu02g02073 437 MobiDBLite consensus disorder prediction 281 320 - -
Adu02g02073 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 244 IPR017930 -
Adu02g02073 437 CDD SANT 197 240 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02073 Adu-Chr2 83797362 83800217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02073 185 435 MYB Transcription Factor Family AT5G58850 51.550 1.70e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu02g02073 Myb_DNA-bind_6 1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02073 K09422 - gmx:100786295 295.049