Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g02009 ATGGATTGCATTGATCCAAGTGGTAACACCATCACATGTGCATCAATAGAAGAACAAGGCTCATCTTCAAACCCAAACAACAAGAGGAAGAAAGGTAATGCTATGAACAACAATAAGAAGAAGAACAAGGGAGTGATGAAACTCTCAACTGACCCACAAAGTGTGGCAGCAAGAGAAAGAAGGCACAGAATCAGTGACAGGTTCAAGATCCTTCAGAGCATGGTCCCTGGTGGCAGCAAGATGGACACTGTTTCTATGTTGGAAGAAGCCATTCACTATGTTAAGTTCCTCAAGGCTCAGATTTGGCTTCACCAAACTTTGATGATGAACTATGATCATGTGGATAACAACAACAACAACAATAATAATAATGATAATAGTATAAATGATCAGTGCTATTATTATTGTTACCCTGCTGATCAGGACATTGTTGTTCCTCTTCATCAGCAACAAAATGTTTCTCCATCAGTTTTTGAGACCTTACCGGAGCTACCATTATCTCAGTGTTGCATTCAAGGTGATGAAGCCACTACCAATATTGATGCTTCTGTTTTGAAAAATTGGTGGCCACCTTATTAA 579 0.3938 MDCIDPSGNTITCASIEEQGSSSNPNNKRKKGNAMNNNKKKNKGVMKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKAQIWLHQTLMMNYDHVDNNNNNNNNNDNSINDQCYYYCYPADQDIVVPLHQQQNVSPSVFETLPELPLSQCCIQGDEATTNIDASVLKNWWPPY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g02009 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 53 108 IPR036638 GO:0046983
Adu02g02009 192 CDD bHLH_AtIND_like 49 109 - -
Adu02g02009 192 PANTHER TRANSCRIPTION FACTOR LAX PANICLE 1 29 176 - -
Adu02g02009 192 MobiDBLite consensus disorder prediction 17 49 - -
Adu02g02009 192 Gene3D - 51 124 IPR036638 GO:0046983
Adu02g02009 192 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 29 176 IPR045843 GO:0003700|GO:0006355
Adu02g02009 192 MobiDBLite consensus disorder prediction 17 60 - -
Adu02g02009 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Adu02g02009 192 Pfam Helix-loop-helix DNA-binding domain 58 97 IPR011598 GO:0046983
Adu02g02009 192 SMART finulus 54 103 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g02009 Adu-Chr2 82832331 82832909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g02009 39 115 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 53.247 6.27e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu02g02009 HLH 6.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g02009 - - adu:107475363 355.14