Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01991 ATGGAGGGTTCAAAATCATTTGGAATAAAGCAAGAAGGGTATCATAATCCTTCATCCATCATGAAAACAGAGGAATTCTCGCTCCGACGCAGCAAAGTGAAGCAAGCATTGATGATATTTCGGAACTTGTTTTCAAAACTCTTTAGCGAGTACAAAACAGATCACTATGATAATGTGAAAGCAAAATTTAAAGCTTTGAATGATGCTGCAATGTTGATGCAGAGGAAGCATCAATGGGTGAACTGCCAAAAACGGGTGGGGCATGTCCCCGGGATTGAAGTTGGAGACCGATTTCAGTATAGGAATGAACTCAATGTCGTCGGCCTCCATCGCCAGTTTGTCAATGGAATCGATTACGTGGGGAAGGGCAAGAACTCTTTAGCCACAAGCATTGTTGTAACCAATCGCTACGATAATGCTAGAAATCATGGTGGTTCATTGGTTTATAGTGGTCATGGATGGAATCCTAATGTGAAAGGTGGATCTATGCCCCGTGATCAAAAGTTGGCCGGCGGAAATCTTGCTTTGAAGAATAGCATGGATGCTAAGAGTCCGGTGCGGGTTATATTGAAGGTTGATGGAAAATCTGGTGGAGGCATAGAGAAGAAAACCAATGATAAATTCTCATATATATATGATGGATTGTATTTGGTTGAGAAGATGATACAAGAAAGAGGAACTCATGGGAAACTTGTATTCAAGTTTTTGTTGAACAAACTTGAAGAGCTACCTTCAACTTGTGTTCCCCCCAAGGATGAGGTTATCAAGAATGTCAACAAATTTGGGCAACTTGATATTTTCACCTTGAGGAAAAGGCTCAAAACTAAAGGTTGTGCAACTAAAAATGATGTTATTATCATGAATGATATCTCTAACGGACAAGAGAAGTTTCCTATTCGAGTCGTTGCATCAACTGATGGTATTAAAAGGCCTCCATCTTTTGATTACATAGTAAACAACATTTATGTTGATAGCTTCGAGAAGCCAATGTTATGTGGTTGTGACTGTGTAAATGGATGTGTGGATTGGGAGAAATGTGTCTGTATTGTTAAGAATGGTGGAACAATACCATATGACTCTAAGAAAAGACTTGCTTCTGGATTGGAATCACGTGTTATATACGAGTGCGGCTCTTCTTGCAAGTGTTCCTCATCTTGCTACAACCGATTAAGTCAACATGGCCTTCAATTCCAACTTGAAATATTCAACTCCGAATCAAAGGGCTGGGGTGTTAGAACGCGCTCGCAGGATAATTTTTTCTCTAGTGGTGTCTTAGTGAGTTTGAGTCTTGGGGGGGAAGGGAAAAAATTTACTCctaaattcgtaaactctttaagagtttacgagttcgcacgagagtttgataacCTTGAAAGGAAAGTCTTGAAGATTGTTGAAAAGTGTTTCATTGATGCTACAAGACGCGGAAACATTGGAAGATTCATAAACCATAGCTGTTGTCCTAATCTTCAAGTCATGGAGGTTATGTATGATGACAATGATAAGAACCTTCCCCATAAAATCTTTTTTGCATTACAGGACATACCTGCTGGAAGAGAGCTGAGTTTTGATTACAACATCTGCAAGCCAAGGGTTATCGGGACTGGCAGCAACATTTGCCAATGTGGTTCACCCAAATGCGTTGGGCGAATTTACATTTAA 1662 0.3887 MEGSKSFGIKQEGYHNPSSIMKTEEFSLRRSKVKQALMIFRNLFSKLFSEYKTDHYDNVKAKFKALNDAAMLMQRKHQWVNCQKRVGHVPGIEVGDRFQYRNELNVVGLHRQFVNGIDYVGKGKNSLATSIVVTNRYDNARNHGGSLVYSGHGWNPNVKGGSMPRDQKLAGGNLALKNSMDAKSPVRVILKVDGKSGGGIEKKTNDKFSYIYDGLYLVEKMIQERGTHGKLVFKFLLNKLEELPSTCVPPKDEVIKNVNKFGQLDIFTLRKRLKTKGCATKNDVIIMNDISNGQEKFPIRVVASTDGIKRPPSFDYIVNNIYVDSFEKPMLCGCDCVNGCVDWEKCVCIVKNGGTIPYDSKKRLASGLESRVIYECGSSCKCSSSCYNRLSQHGLQFQLEIFNSESKGWGVRTRSQDNFFSSGVLVSLSLGGEGKKFTPKFVNSLRVYEFAREFDNLERKVLKIVEKCFIDATRRGNIGRFINHSCCPNLQVMEVMYDDNDKNLPHKIFFALQDIPAGRELSFDYNICKPRVIGTGSNICQCGSPKCVGRIYI 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01991 553 Pfam SET domain 454 526 IPR001214 GO:0005515
Adu02g01991 553 SUPERFAMILY SET domain 279 532 IPR046341 -
Adu02g01991 553 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 19 550 - -
Adu02g01991 553 ProSiteProfiles YDG domain profile. 87 239 IPR003105 -
Adu02g01991 553 SMART G9a_1 82 243 IPR003105 -
Adu02g01991 553 Pfam SAD/SRA domain 86 241 IPR003105 -
Adu02g01991 553 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 19 550 - -
Adu02g01991 553 SMART preset_2 287 381 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu02g01991 553 Gene3D SET domain 264 531 IPR046341 -
Adu02g01991 553 ProSiteProfiles Pre-SET domain profile. 332 394 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu02g01991 553 Gene3D - 68 261 IPR036987 -
Adu02g01991 553 ProSiteProfiles SET domain profile. 397 526 IPR001214 GO:0005515
Adu02g01991 553 SMART set_7 397 532 IPR001214 GO:0005515
Adu02g01991 553 SUPERFAMILY PUA domain-like 69 245 IPR015947 -
Adu02g01991 553 Pfam Pre-SET motif 290 389 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01991 Adu-Chr2 82559577 82561438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01991 65 549 Su(var)3-9 homologs AT1G73100 33.650 1.83e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu02g01991 SET 1.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01991 - K11420 aip:107627681 799.66