Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01969 ATGTCAGGTATATTTACGGACACTGAGATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATGAACAGAATGAATTCGAACAAGATTTCAGAGATGAATTTACCGAGGGAGCATTTTTTTCTGAATCTGATATGTCAGATTATATCCTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACATCTTTGAAATTTAGTGAGAACTTTGCGGAGGAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAAAATAGTAGTTGCGAGATTTACAGACAAATGTTTGTATGCCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCAGGGATCAGCACCTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTACGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTAACGATTCAAGAGCACACATGCGCTTTAACGAATTTAATGCTGATTATGAATCTACAAGTGGGGTGCCCGTCACGCAAAATTGTATAGAGCTGCTAGAGAGATATGCTGTTGAGTTATACACTTATGAGATATTTTTTTTCTTTCGGCCATTTCTCTCCAGAGCTGGATCAATGCGGGTTCTGAACATAGATAATACCGATGATTGCATAAAGTACATTGTGTGTAAGCATGGGAGGCCCAATTTTACGTGGACCGTTGATTTTCGTCAAGAAGAAATGATCTTCATGTGTACCTGTTTACGAATGGAGTCATTTGGTATTCCCTGTGAACATATTGTGAAAGTTCTGGTTGACAGAGACATCCGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAAATGTTAAATCAGCACTCAATGATCCAAGTGGGTTCACCAGGGATGCTGTTGTTATTAGTCGTCAAAGTGCTTTGGTGGAATTTTCTAAACAACTGGCTGCTGTTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGATTTAATTATGGGATTGTACTCATCTTACAAGGCTGCAGACGAAGGAGATAATCAACCTCACTCAGGTGTAGCTAGAAGTAGCAATCCGTATGTGCATCCAACCACTGGAGGCTCAGGACAGCCATCTAAGAAGAAGAAGCGGCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAAGGACATTGACAACAACATTATGGAGAATGAAGCAATCGGTTCGGACGATGGAGACATGTGTACCGAAGCGACGGCTGAGTTAGATAGTGATAGTTAG 1698 0.4122 MSGIFTDTEMNEQYQEDDDFNQQEELVSDQDMMDEQNEFEQDFRDEFTEGAFFSESDMSDYILEAAYAVDSVQDITSLKFSENFAEEIGKYHFSTLQLAFDFYMKYSKSKGFSARKSKTFKNSSCEIYRQMFVCHRQGFRMEKYYTMEKRKKEPRLETRTGCEARMDVKFVPESGRWHIFYFSDEHNHDLLDTQFSAMLPAHRKMSEADIMQMMNMLKSGISTSQIFGLLASQAGGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACNDSRAHMRFNEFNADYESTSGVPVTQNCIELLERYAVELYTYEIFFFFRPFLSRAGSMRVLNIDNTDDCIKYIVCKHGRPNFTWTVDFRQEEMIFMCTCLRMESFGIPCEHIVKVLVDRDIREIPRSLVLDRWTKNVKSALNDPSGFTRDAVVISRQSALVEFSKQLAAVAAKVPERYEETRDLIMGLYSSYKAADEGDNQPHSGVARSSNPYVHPTTGGSGQPSKKKKRQRCSVCQMEGHKKTTCPWQKDIDNNIMENEAIGSDDGDMCTEATAELDSDS 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01969 565 Pfam FAR1 DNA-binding domain 101 191 IPR004330 -
Adu02g01969 565 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 291 467 IPR031052 GO:0006355
Adu02g01969 565 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 82 289 IPR031052 GO:0006355
Adu02g01969 565 MobiDBLite consensus disorder prediction 544 565 - -
Adu02g01969 565 PANTHER OS03G0181600 PROTEIN 82 289 - -
Adu02g01969 565 MobiDBLite consensus disorder prediction 480 517 - -
Adu02g01969 565 PANTHER OS03G0181600 PROTEIN 291 467 - -
Adu02g01969 565 MobiDBLite consensus disorder prediction 1 22 - -
Adu02g01969 565 ProSiteProfiles Zinc finger SWIM-type profile. 366 404 IPR007527 GO:0008270
Adu02g01969 565 MobiDBLite consensus disorder prediction 487 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01969 Adu-Chr2 81970920 81973277 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu02g01969 FAR1 1.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01969 - - ahf:112720852 561.222