Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01949 ATGGGGTCTAGGAGCCATGAAGAATCCCCATGGCTATTGGAAAATGGGAATCCAAAGGTGTTGACCAAGGATATGAGACATGGAAGAACAGCACACAACATGTCATCATCTTCTTTGAGGAAAAAATCTGAACTCACTGTTATTTCAAAGGTTCCCTATGGATTCCTCAGAAACTTTCTTGCTAACTTGCAAGAGGTTTTTCTTGGAACCAAGCTTTTCATTCTCTTCCCATCAATTCCTCTTGCTATCATTGCCCATTGTTTTGGTTTTGCAAGACCATGGGTTTTTGCCTTGAGCTTACTTGGTTTAACCGTACTTGCTGAAAGAGTCAGCTTCATGACTGAGCAAGTGGCTTGTTACACTGGTCCCACAGTTGGAGGACTTCTGAATGCTACATGTGGGAATGCAACAGAGCTTATCATAGCAATTTTTGCACTTAGTAACAACAAAATTGCTGTGGTCAAGTATTCTCTTCTTGGTTCTGTACTTTCAAACCTTCTTTTGGTTCTTGGCACTTCCCTACTTTGTGGTGGCATTGCAAATCTTAGGCAGGAGCAAAAATATGACAGAAGGCAAGCTGATGTGAACTCTCTTATGCTGCTTCTGGCATTGTTGTGCCACATGCTCCCACTGCTGTTCAGATATGGCAGCGGCTCACCGGCTGTGGTGGCCCAGGCATCCTTGAATGTGTCTAGAGCTGCTAGCCTTGTGATGTTGTGTGCTTACTGTGCTTACATTGCCTTCCAACTTTGGACTCACCGGCAACTATTCGAAGCACAAGTAGATAATGATGATGAAGGTCAAAATGATTCAGAAGAAGCAGTGATAGGTTTCTGGAGTGGGATTGGTTGGCTTGTTGGAATGACTGCAATTATTGCTCTCTTGTCTGAATATGTGGTGCAGACTATAGAGGATGCATCAAATTCATGGGGTTTGTCTGTGAGTTTCATCAGCATAATCTTGCTCGCAATCGTTGGCAATGCCGCCGAACATGCTGGAGCTGTCATATTTGCTTTCAAGAACAAACTGGACATCACATTAGGTGTTGCTTTGGGGTCTGCAACTCAGATTAGCATGTTTGTGGTTCCAGTGTGTGTGATTGTTGGTTGGATTCTTGGCATAAAAATGGACCTCAACTTCAACCTCTTGGAGACAGGTTCTCTTGCTTTGGCAATAATTGTCACAGCCTTTACATTACAGGATGGAACTTCTCACTACATGAAAGGCCTTGTTCTCCTTCTATGCTACATTGTTATTGGGGCCTGCTTTTTCGTTCAGACAACACCCTCTGATCAACTTAATGATGAAGTTCATAATGTGATGCTTAAACCAGCAACCGATGCAGTTTTTAGAGCTTAA 1359 0.4312 MGSRSHEESPWLLENGNPKVLTKDMRHGRTAHNMSSSSLRKKSELTVISKVPYGFLRNFLANLQEVFLGTKLFILFPSIPLAIIAHCFGFARPWVFALSLLGLTVLAERVSFMTEQVACYTGPTVGGLLNATCGNATELIIAIFALSNNKIAVVKYSLLGSVLSNLLLVLGTSLLCGGIANLRQEQKYDRRQADVNSLMLLLALLCHMLPLLFRYGSGSPAVVAQASLNVSRAASLVMLCAYCAYIAFQLWTHRQLFEAQVDNDDEGQNDSEEAVIGFWSGIGWLVGMTAIIALLSEYVVQTIEDASNSWGLSVSFISIILLAIVGNAAEHAGAVIFAFKNKLDITLGVALGSATQISMFVVPVCVIVGWILGIKMDLNFNLLETGSLALAIIVTAFTLQDGTSHYMKGLVLLLCYIVIGACFFVQTTPSDQLNDEVHNVMLKPATDAVFRA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01949 452 Gene3D - 123 424 IPR044880 -
Adu02g01949 452 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 5 437 - -
Adu02g01949 452 TIGRFAM cax: calcium/proton exchanger 78 424 IPR004798 GO:0006816|GO:0015369
Adu02g01949 452 Pfam Sodium/calcium exchanger protein 94 251 IPR004837 GO:0016021|GO:0055085
Adu02g01949 452 Pfam Sodium/calcium exchanger protein 282 419 IPR004837 GO:0016021|GO:0055085
Adu02g01949 452 TIGRFAM caca2: calcium/proton exchanger 58 424 - -
Adu02g01949 452 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 5 437 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01949 Adu-Chr2 81372674 81377636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01949 10 433 Antiporters AT2G38170 70.737 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01949 K07300 - gmx:100782052 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01829 04 91605296 91610757 Adu02g01949 02 81372674 81377636 PCT