Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01947 ATGAATCAATTGGGAAGTAGAAGTCAAGCTTCTCCATCTTCAACAAACAAGAAGAAGATTGAGAGAAGGGTCATTGAGAAAAACAGAAGGAACCACATGAAGATGCTCTACTCCAAACTCAACTCTCTTCTCCCTAGGCCCAAGGAACCGTTGCCATTGCCTGATCAAGTGAACAAGGCCATAAATTACATAAAGAGCTTAGAGGAGAAGGTGAAGATGGCTAAGGAAAAGAGAGAGAGGTCGTTGGGAATTGGAATCCGAAGAAAGAGGACGCGTGGTGATTGCAGCGGTGTTGATCGCCAGAAACCGCCACAACTTGAGGTTCATGAAATAGGTTCGTGTGTTGAAATTGAAATGACATGTGGATTAGATACTCAGTTCATATTCTATGAAATCATTCGTATTCTGAATGAAGAGAAGATTGATGTCAAGAGTGTCAATTCCTCACTTATCGAAAATTTCATGTACCATGTTGTTCGTGCAGAGATCTTACCGTCTTTGCTTCAATTCGGTGTGACTAAAGTAAGTGAGAGATTGAAAAGGTTTGTGAATGAACCAACCAGTGAAATTGAATTACAATCTGATTATCAGTTGTTGGATTTTGAGATTAATACTGATGAATTAGCGGAGCTTTTAGGTTTTTTAGAAGAGAAATAA 657 0.3927 MNQLGSRSQASPSSTNKKKIERRVIEKNRRNHMKMLYSKLNSLLPRPKEPLPLPDQVNKAINYIKSLEEKVKMAKEKRERSLGIGIRRKRTRGDCSGVDRQKPPQLEVHEIGSCVEIEMTCGLDTQFIFYEIIRILNEEKIDVKSVNSSLIENFMYHVVRAEILPSLLQFGVTKVSERLKRFVNEPTSEIELQSDYQLLDFEINTDELAELLGFLEEK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01947 218 Coils Coil 57 77 - -
Adu02g01947 218 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 13 190 - -
Adu02g01947 218 MobiDBLite consensus disorder prediction 1 15 - -
Adu02g01947 218 Pfam Helix-loop-helix DNA-binding domain 19 68 IPR011598 GO:0046983
Adu02g01947 218 SMART finulus 23 73 IPR011598 GO:0046983
Adu02g01947 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 17 67 IPR011598 GO:0046983
Adu02g01947 218 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 13 190 IPR015660 GO:0003700|GO:0006357
Adu02g01947 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 78 IPR036638 GO:0046983
Adu02g01947 218 MobiDBLite consensus disorder prediction 1 23 - -
Adu02g01947 218 Gene3D - 8 91 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01947 Adu-Chr2 81337634 81342089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01947 12 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 33.155 5.53e-24 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu02g01947 HLH 3.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01947 - - gmx:100817883 220.32