Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01934 ATGAACAGAGGACTCTGTGGCGCTTCGCGCTTGCAATTCCCAGAATGTGAAACAATGGGTAGATCTCGAAAAACAACTGCCTACATTTTCTTGAAATATATTTTACCAATAAGTAGTGTGGCCACCATACTTGAATTGGCATTCCTAAGGATCTTAAAGTTCCAAAATCATAATAAGGTGCTTCAAAAATTTGAAGTGGATCAAGCAATGGCAAGATGGAGAAGAATTTCATATTATGAAATTCAACAAGCAACAGATAGGTTTAATGGTGACAACTTACTTGGTATAGGGAGCTTTGGAAAAGTTTACAAAGGCGTCCTCTCGGACGGGACGAATGTTGCAATAAAGGTTTTCAATTTGGGGCTAGAAGGAGCATTTAGGAGTTTTGATCTTGAATGTGAAGTATTGCGCAATATTCGCCATCGAAACTTGACCAAAATCATAAGCAGTTGTAGTAACTTGGATTTCAAGGCATTGGTTATGAGCTACATGGTCAATGGGAGTTTGGAGAAGTGGTTACATTCAGAAGACCATAGTTTGAGTATGATAGAGAGGATTAACATAGTGATAGATATTGCAGAAGCAATTAATTATCTTCACCATGGTGGTTCTATATCAATTGTGCGTTGTGATTTAAAAGCAAGCAATATACTGGTAGATGAAGACATGGCTGCTCATGTCACAGATTTTGGCATTGCAAAGCTGCTAAATGGTGGAAATTCCATGACACATACATTGACTTTAGCCACAATGGGGTATATGGCTCCAGAGTATGGACTAGAAGGCTTGGTGTCCAAACAAGGTGATGTGTATAGTTATGGCATTTTACTTATGGAAATCTTCACACAAAAGAAACCCACTGATGAAATGTTTATGGGAGATTTTAGCATCAAGCATTGGGTTGATTCCCTAATTGACATAGTTGATGCTAGATTGTTAATGGAAGAAGGAGAACTAGCTTCCAAGAAAGTGTATTTATCATCCATCATGAAACTAGCTTTGGATTGCACCAAAGAATTACCTCGAGAAAGGACCAATATGAAAGATGTCATAACTACACTTAAGAAGATTAAAATGGCGTTCTTATAA 1089 0.3765 MNRGLCGASRLQFPECETMGRSRKTTAYIFLKYILPISSVATILELAFLRILKFQNHNKVLQKFEVDQAMARWRRISYYEIQQATDRFNGDNLLGIGSFGKVYKGVLSDGTNVAIKVFNLGLEGAFRSFDLECEVLRNIRHRNLTKIISSCSNLDFKALVMSYMVNGSLEKWLHSEDHSLSMIERINIVIDIAEAINYLHHGGSISIVRCDLKASNILVDEDMAAHVTDFGIAKLLNGGNSMTHTLTLATMGYMAPEYGLEGLVSKQGDVYSYGILLMEIFTQKKPTDEMFMGDFSIKHWVDSLIDIVDARLLMEEGELASKKVYLSSIMKLALDCTKELPRERTNMKDVITTLKKIKMAFL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01934 362 SUPERFAMILY Protein kinase-like (PK-like) 68 354 IPR011009 -
Adu02g01934 362 Gene3D Phosphorylase Kinase; domain 1 57 163 - -
Adu02g01934 362 SMART serkin_6 88 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01934 362 Gene3D Transferase(Phosphotransferase) domain 1 164 361 - -
Adu02g01934 362 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Adu02g01934 362 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 362 - -
Adu02g01934 362 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 2 362 - -
Adu02g01934 362 PIRSF ILK 36 362 - -
Adu02g01934 362 Pfam Protein tyrosine and serine/threonine kinase 92 354 IPR001245 GO:0004672|GO:0006468
Adu02g01934 362 ProSiteProfiles Protein kinase domain profile. 88 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01934 Adu-Chr2 81060232 81061805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01934 2 361 Receptor kinase-like Gene Family AT3G47570 37.150 1.69e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Adu02g01934 PK_Tyr_Ser-Thr 6.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01934 - - aip:107613554 513.457