Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01916 ATGCCTCGCCGTAGTGCTCCGTCCTCATCATCGCCGCCGAGGCCAACACCTATTCCGGCCAAATTCTGGCGTGCATGTGCTGGAATCTCTGCGCACGCACCAGTAGTGAACTCTAGGGTTTACTACTTTCCACAGGGACACATCGACCAAGCTGCTTCGCAACCGCTTAACCTTTCACCTCTAGTTTACTCCAGGCCGGTCATCCCTTGCCGTGTCGCCGCCGTCAACTTTTTCGCGGACCCTAACACCGACGAGGTCTTCCTCAAGATTCTTCTCCTTCCTGTCACCGATGGATCCGCTCAGGATTTTCTTTCACCTGCCGTCGCCGCCGAAGGCAGCGGCAACGGCAATGGCGACGATGAAAAGGTTGAGTCGTACGCCAAGATTCTCACGCGGTCCGATGCGAACAATGGCGGAGGGTTTTCGGTGCCGAGATTCTGTGCGGACTTGATCTTCCCGCCGTTGAACTTTGAAGAGGACCCGCCGGTGCAGACGCTTCGCATAACCGACCTCCACGGCGCCGTTTGGGAGTTTCGCCACATCTACCGAGGGACGCCGAGACGGCACCTCTTCACTTCTGGCTGGAGCAAGTTCGTTAACAGCAAGAAGATTATCTCTGGCGATACTGTGGTCTTCATGAAGGACTCCGATGGCAGGATGTTTGTCGGAATCCGTCGCAATATGTCACCGGACGACGGTATCTCAGACGGCGGATTGGATTGGTTATCAAAGATCGTTGGGATGGACGAGGGGGAAAAGGAAAAAGAAGAGGAAGATGAAGAGGTGATGATGGAAGGGTTTGCAAGAAACGGGAAGGGGAGGGTGAGTTCGGCTTCAGTGGCGGAGGCGATGGAGCTGGCGGCCCAGAACAAGCCGTTCGAAGTTGTTTACTATCCAAGCGTGGGTTGGGGGGAGTTTGTGGTAAAGGCAGAGGATGTAGACGTGAAGATGAACGGTATTCTCTGCAGTGTTGGGATGAGAGTGAAGATGGCTAGAGAGAACTACGATTCTTCACGGATGACTTGGTTTCAGGGAACAGTTTCTGGTGTTACTATTCCCGGTGAAGCTCAACCATGGAGCGGTTCTCCTTGGCGCATGCTTCAGATTACATGGGATGAATCTGAAATCTTGAAGAATGTAAGTCCCGTTAGTCCATGGCAGGTGGAGTTTCTTTCTGGCACACCTTCACTTCCTCAAGTATTTCCCCCAACAAAAAAGTTCAGAACTGCAGACGGTTCTAAAATTTTCAGTCATGAAGTGGAAGAATCCTCCTTTTCCATGACAAGACTTGCTATTCCTGATTTAGCAATGGGAGTGCTGAATCAAACATTGTTGATGAGTAGTTATGGCACCCCTTTTCCTGCTAGCATTCAGGGAGCCAGGCATCCTCTACTTTCTGCACCTACTTGTCCCATTTTTCCGATTAATCCTCCTCTGTCTATTGCTAACTCCTTTGAGAATAACATTAGACCAAGGTTAAATGCTATGTTGACACTCATAAACCTGAAAGCTTATCTCCACATAACAAGTCTAGTTTGA 1539 0.5062 MPRRSAPSSSSPPRPTPIPAKFWRACAGISAHAPVVNSRVYYFPQGHIDQAASQPLNLSPLVYSRPVIPCRVAAVNFFADPNTDEVFLKILLLPVTDGSAQDFLSPAVAAEGSGNGNGDDEKVESYAKILTRSDANNGGGFSVPRFCADLIFPPLNFEEDPPVQTLRITDLHGAVWEFRHIYRGTPRRHLFTSGWSKFVNSKKIISGDTVVFMKDSDGRMFVGIRRNMSPDDGISDGGLDWLSKIVGMDEGEKEKEEEDEEVMMEGFARNGKGRVSSASVAEAMELAAQNKPFEVVYYPSVGWGEFVVKAEDVDVKMNGILCSVGMRVKMARENYDSSRMTWFQGTVSGVTIPGEAQPWSGSPWRMLQITWDESEILKNVSPVSPWQVEFLSGTPSLPQVFPPTKKFRTADGSKIFSHEVEESSFSMTRLAIPDLAMGVLNQTLLMSSYGTPFPASIQGARHPLLSAPTCPIFPINPPLSIANSFENNIRPRLNAMLTLINLKAYLHITSLV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01916 512 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 503 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu02g01916 512 Gene3D - 123 228 IPR015300 -
Adu02g01916 512 CDD B3_DNA 125 226 IPR003340 GO:0003677
Adu02g01916 512 SUPERFAMILY DNA-binding pseudobarrel domain 122 230 IPR015300 -
Adu02g01916 512 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Adu02g01916 512 PANTHER AUXIN RESPONSE FACTOR 12 503 - -
Adu02g01916 512 Pfam B3 DNA binding domain 127 227 IPR003340 GO:0003677
Adu02g01916 512 Gene3D - 322 395 - -
Adu02g01916 512 Pfam Auxin response factor 283 368 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Adu02g01916 512 SMART B3_2 126 228 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01916 Adu-Chr2 80588113 80590715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01916 23 462 B3 DNA Binding Superfamily AT1G77850 48.869 2.03e-132 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu02g01916 B3 6.2e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01916 - - adu:107475253 966.066