Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01909 ATGGCTCGAACTCCAACAACAGTTGCAGCAACAACAATCACACTACCTCGCTCAGATGCAACACAACGCCGATGTTTCAACGTACCGCAGTTTCAAACTATGGAACGAGCATCAGCTCCAGCAACAACATCACGTGATAGCACATCACCATCAATCCCGTCCTCTCTTCCACCGAGATCTCCACTCATCGGTTATTGCGCTTGGCATAGCGTCAGTAGAGCATCTGATGAGCAGTCTCTGTCGAGATCGGCGGTTATGGCAATGCGGACTTGTTGCAAGAGTCGTGGGTATGAGTGCAAGACCCACGTGAAGAGCACGTGGGTCCCAGCCGCTAAGCGTTGCAAGCGCCAACAGCAGTTAATGGCGCTTCAGGATCACTAA 381 0.5171 MARTPTTVAATTITLPRSDATQRRCFNVPQFQTMERASAPATTSRDSTSPSIPSSLPPRSPLIGYCAWHSVSRASDEQSLSRSAVMAMRTCCKSRGYECKTHVKSTWVPAAKRCKRQQQLMALQDH 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01909 126 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 88 113 IPR006510 -
Adu02g01909 126 Pfam Domain of unknown function (DUF702) 84 125 - -
Adu02g01909 126 MobiDBLite consensus disorder prediction 31 53 - -
Adu02g01909 126 PANTHER PROTEIN SHI RELATED SEQUENCE 7 88 124 - -
Adu02g01909 126 MobiDBLite consensus disorder prediction 31 59 - -
Adu02g01909 126 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 88 124 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01909 Adu-Chr2 80419733 80420236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01909 86 124 C2H2 Transcription Factor Family AT3G51060 74.359 2.30e-14 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Adu02g01909 DUF702 1.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01909 - - ahf:112720334 82.0333