Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01892 ATGGCTTCGCCGTCTCCATCAATGGAAAGAAAGGTTGCCGGGGATGAAGATACCACTGGGGGTGAAGCAGACCATAGAGTTGGATCGGTTGAGGGCGAAGGCTTTGCAAGGTTGGAGTCGGACGAGTACGATTTACAGGAAGATGAAACAGAAAACGACCATCCGGTTGAGGGCAAACGTTCTGCAGGGATGGAGTCGGACGAGAACACTTTCAGGAAGATGATACAGAACACGACCATCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGACGGCGCCGGAGGAATATGTTGACATTGCATTTGAGTTCTACCAACAATATGCAAAGCACCATGGCTTCGGCGCGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTTGTGTGCCACCGACAAGGGTTCCGATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGCTGGCACGTTGCGTTTTTTTCAGACGTGCATAACCACCACGTTCTTGAGTTGCAATTTTCTTCCATGCTCCCGGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCTCGAATCTACGGTTTTATGGCGAGCCTGGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTAAATGCGAAGCAACGAAGGGAGGGTGGCCAAGATGCGGAATCGTGCCTAAGGTATCTCCGAGAGTGCAAGGCAAATGATCCAACACTATACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACacttgttttggtgtgacggcaccagccaaattgattaccaggaggtggaggctgatttcgagtgtgcaaagggTGACTCTGTTATGACCACCAACCTGAAACAGCTGGAGCGGAGTGCAGTCGACAACTACACTCGTGCGATATTCTATTTATTTGTTCCCATTCTTGACAGGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACACCATCTCTCGATACGGCACTCCGGGGAAGGATTGGCGTGTTGTTGCAACGTTTGATACGAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTTAGGGTCCCATGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCTGAGGTCTCTGATATTACCGAGATGGACCAAGGATACAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTGTACAACTGACGCAACACTGGTGCCTGAGGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAGCACCGAAAAGTTCCAGTTTGCAAGAGACATAGCCGTGCTGATGCTGAAGCACTTCGAGAACGAAGATGCAGGGAACACCAATTTTCCACCCAAGGGGCCACCTACTGAGGGTGGCAGACCCCTGGCGCGGAATCCACCCAGGCGCAATACAAAGGGTAACGGCGCTCATGGTGGAAAGAAAACCCAGCGATGTCGTTTGTGCCGGGAGGTGGGACACAACAGGACAACGTGTCCGGAGCGCCACACAATGGAACCATCCAGCGCAGTTGCAGAAGACATGGATTCGATGGACACTGACATGGTCTATGATAATTTATCCGGCGATCTGTATGCAACCGCGGAGATTCCTTCGTTCCAATGCTCCGATAGTGACACGCAGGCTGGGTTTGCTAACAGCAACTTCGCTGGGACCAACACGTCCGGACCAGTCATGTCACTCGCCGATTGA 1881 0.5008 MASPSPSMERKVAGDEDTTGGEADHRVGSVEGEGFARLESDEYDLQEDETENDHPVEGKRSAGMESDENTFRKMIQNTTIMQRPMSTMGMRLNWKTVWTAPEEYVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGFRSPKFYSMPNRQKRPRAETRCGCPARMLLRMDDESGRWHVAFFSDVHNHHVLELQFSSMLPGHRRMSEADIEQMNDMRKGGIGVSRIYGFMASLAGGYHNVPYTTRDMHNVNAKQRREGGQDAESCLRYLRECKANDPTLYYKEVVDGEGVLQHLFWCDGTSQIDYQEVEADFECAKGDSVMTTNLKQLERSAVDNYTRAIFYLFVPILDRACAMRVVDSEDNGSYFIHTISRYGTPGKDWRVVATFDTREVRCTCMRMECFRVPCEHIIAVLVLNNVHEILRSLILPRWTKDTKLVAVQSMGVIWDSVQLTQHWCLRDWYRKVCKIACHSTEKFQFARDIAVLMLKHFENEDAGNTNFPPKGPPTEGGRPLARNPPRRNTKGNGAHGGKKTQRCRLCREVGHNRTTCPERHTMEPSSAVAEDMDSMDTDMVYDNLSGDLYATAEIPSFQCSDSDTQAGFANSNFAGTNTSGPVMSLAD 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01892 626 MobiDBLite consensus disorder prediction 10 41 - -
Adu02g01892 626 PANTHER OS02G0262500 PROTEIN 108 314 - -
Adu02g01892 626 MobiDBLite consensus disorder prediction 52 67 - -
Adu02g01892 626 MobiDBLite consensus disorder prediction 1 68 - -
Adu02g01892 626 MobiDBLite consensus disorder prediction 501 540 - -
Adu02g01892 626 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 317 483 IPR031052 GO:0006355
Adu02g01892 626 SUPERFAMILY Retrovirus zinc finger-like domains 527 562 IPR036875 GO:0003676|GO:0008270
Adu02g01892 626 ProSiteProfiles Zinc finger SWIM-type profile. 388 424 IPR007527 GO:0008270
Adu02g01892 626 Pfam FAR1 DNA-binding domain 110 199 IPR004330 -
Adu02g01892 626 PANTHER OS02G0262500 PROTEIN 317 483 - -
Adu02g01892 626 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 108 314 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01892 Adu-Chr2 79974968 79977810 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu02g01892 FAR1 5.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01892 - - adu:107493880 608.986