Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01889 ATGACGGAGGGAGGACAGGAGGAGGAAAGGCATAGAAGAGGTGGGGGCGAGTTGACGAGTCAACGGCGAGGTGGCAAAGGAAATGGCGTGAGTGACGACGGTGAAGACGGATCAAGAAATTATAAGCAACCCAGACGTCCTTTCTCCTTCTTCTATAGACGAAACAAATGTGAGGATATCACCAAGATTGTAAAACATGTTACTCATCACCTCGACATGTTCATTGTTGATCATCCAGTGGGAGTAGAAGCACGGGTGCAAGATTTAATTCAACTTCTAAATTGTGAGAAATCAAAGGATGTCCTTCTACTGGGCATCTGGGGAATGGGAGGCTCTGGTAAAACAACGATTGCCAAAGTAACTTGTAATAAGCTTTGTCGGGATTATAAAGGTCGTGGGATATTCCTCCAAAATATAAGCGAGGGATGCAAAATAATACCTCATCCTACAATATATAAAGTTCTAAAGAGAAGCTTCGATGGATTAAGTGACAGCAGAGTGGAAAACATATTTCTTGAGATAGCTTGCTTCTATATTGGGTTGGATCAAAATGAGGTAGTACAAAAATTAAATAATGACTTTGGAGATTCAGCAGAAACAGTAGTAGCTGCCTTGGTTGAGCGATGCCTTGTCACTGTTGACAAGATGAACAAGATTCGAATGCATGTTTTGCTCCGCAACATGGGAATTGAAATATTTCGCCAGCGACAACGTATGCACCCTGAGCAACGGATCTATGACGTGTTCTTAAGCTTCAGTAAAGACACTCCTCCGTCATTCATTTCACGTCTCACTGATTCTATGAAAAAAGCCGGAATGTCTTTTTACAAGAATGATGACTCGCTTTCAGGGGACGACCAGATATCCCGATCACTATTGGCAGTAATCCAAAAGTCGAGAATTTTCATCATTGTTTTATCAAAAAATTACGCTCGTTCTACAAGGTGCCTACAGGTTTTGGAGCAAGTAACTGGATATCGCAGAATCGGGGGGCAGTTTATTCTACCAGTGTTCTTGGATGTAGATCCCAAAGATTTACGTTTGCAGAGAGAATTCACACAGGCTTTTCGTGATCTCAAAGAAAACGTCTTAGACAAAGCTGCGGTTGATCGTTGGAAGATAGCTTTTGCACGAATTTTCCAAATTCGATCCTTCAAGTTCGTATACGAGGCCGCAAACGGGACTAACAGGAGCAAAGATGATGATGTTGCCCTCAGAGTTGTTGAACGTGCTAAGGACTTACTGGATAAAAGAAACTTGTTTATTGTTGAGTTTCCTGTTCAAGTCGATTTTCATGTGACGGAGGCAACTCAATTACTGACCCACCGCAAATCAAGAGGTGCTCTACTACTAGGGATATGGGGGATGGCTGGCATTGGAAAAACAACTATTGCCAAGGCCATTTATAATAAAATTGGTGGAGATTTTGAGGGTAGAAGCTTCCTCCCAGAAATGGATGAGAGTAAATCTTTGGTGCTCCTCATTAAAATCCTCAAAGGAAACTTTAAGATAGTTAGTAACACAAGTTCCCAAAAGCTTGTTGCTTGTGCCAGGGGATTACCGTTAGCGCTAGAAATCCTTGGCTCTGGAGTTTCTAGTACCTCAGACATGGTTAATATGTCACTTGAATCTCCCCATCCAATAGTACGAAATGTTCTGGAAAGATGCATCAACGATTTAAGTTACCTGCAGAAAAGCATGTTCCTTGACATAGCTTGTTTCTTAATCGGGATGGATCGAGAAGAGGTTATACAAGCATTGAACGTCCATCGAAACTTGGCTGAAGACGGAATAAATACTCTTGAAGATCAATCCCTTGTAACGTTTGATAAGCAGAACAAGATTAGAATGAATGTTTTGCTACAAGAGACAGCAAGGAAGATTGTTCATGACAATATACAAAGCAAGCCTCAGGTAGTAGTGTGCACTATGCGgtacaaggaggagagttggaggaaggcgctTCGTCATATTGGTGGCATTGCAGGGATTGAGATCATAGGTTCCAGGAACGAAAGTGAGGATATCAATCGAATTGTTGAACATATCACTGGTTTTCTAGGAAAGACATTCTTCTTTGTTGCTCAGCATCCAGTTGGAGTAAATTCTCGTGTGGATCATGTGGTCAAACTGTTAAACCACCGAAGATCAAAAGATGTTGAAGTATTAGGGATATCAGGAATTGGAGGCGTTGGAAAAACAACAATTGCGAAAGCCATTTATAATCAGATTCATCGTGACTTTGAGGCTTGCTGCTGTCTCTTAGATATCAGAGAAAAATGGAAGCAAATTACTTGCCAAGTTGATTTACAAAACCAACTTTTGTCTGATGTCTACACAACAACTAAAATAAAGATAAGAGATATTGAATTGGGGAAGACCATTTTGAAGGAAAGACTTCAGCATAAAAGAATACTACTGATACTCGACGATGTTGATGATTTATCCCAACTAACTGCTTTGTGCGGAAGTCGTAAAtggtttggtcaagggagtagaataataataacaacaagagatgaaggtttgctTAGAATACTTAAAGTTGATCATGTATCTAGAATGTCAGAAATGGACGACGATGAATCTATTGAGCATTTTAGTTGGCATGCATTCAAAAAAGCAAGCCCCCAAGAAGATTTTGCTCAAATTTCTAGAGATGTTGCTGCATATTGTAAAGGACTGCCACTGGCTCTTGAAGTTATTGGATCTCTTTTGTTTGATAAGGAGATAGAAGAGTGGCAAAGCGTATTGGAGAAGCTACAGATAATCCCCAATCGTCAAGTACAGAAAAAGCTAAGAATAAGCTTTGATAGTTTGAGTGATGATACAGAGAAAGAAATATTCCTTGACATAGCCTTTTTCTTCATTGGGATGGACCAAAATGATGTACTACATATTTTAGATGGAGCAAATCACCCTTCTGTTGGAATAAAAACCCTTAAAGATCGTTGCCTTGTGACCATTGACAATAATAACAAGCTTGGAATGCATGACTTGCTGCGAGATATGGGGAGGGAAATTGTCCGTGAGGAATCAATAAAGGAGCCAGAGAAACGAAGCAGGTTATGGTTGCAAAAGGATGGTACAAGAGCAGTTGAGGGATTGGCTTTGAAGTTGACCAGAAATAATACTGTTTGTTTCAAGACTGAAGCATTTAAGGAAATGCATAGACTTAGATTACTTCAACTTGCTAGTGTGCAGCTTGATGGAAATTTTGAATATCTTTCACAAGAGCTAAGATGGCTCAATTGGCATGACTTTCCTTTAAAGTACATGCCTCCAAACTTTTATCAGGAAGGTTTAGCTGCCATTGAGTTAGAATCTAGTTGTCTCACGCAGCTGTGGACAGAGGATAAGTTGTTGGTGAAATTAAAATTTCTCAATCTCAGTCATTCTCATCACCTGACACAAATTCCAAACGTTTCCTACTTGCCTAATCTTGAAAAGCTCTTACTCAAGGACTGTCCAAACTTGACTATGATTCCAGATACCATTGGAGATCTTAAGAAGATTCTTCTGATAAATTTGGAAGACTGCACAAGTCTTTCTAACCTTCCAAGAAGCTTCTATAGGTTAGAATCTCTGGAAACTATGATTATTTCTGGATGCTCGAAGATTGACAAATTGGAAGAAGAATTGGAACAAATGAAGTCCTTGGTGAATTTAATTGCAAATAGGACTAGCATAACAAAAGTTCCATATTCAACAATAAGATCGAAGAGTGTCAGATATATTTCAATATGCGGCTACGAAGGATTCTCGCGTGATGTGTTTCCTTCTCTGATCTGGAACTGGATGTCACCAACAAATATTCTCTCTTTTTCCACATTGATTCAAACATCTGCATGCCCAGAATTTGTTCCCATGGATGTAATAATAAAGCTTCATAGCCTTCGTCGCTCAAAGAATAAACAAGGTGTGAAAAGAGTTCTTGACATCTTAGATGCCGCATATTGCAAGCAAGTAGAAGCTAAGCAAACTGCATCACAGAAATTGACTGCTAGTGGGCCAGATGATTGTTTGTTGTCAAGTGACAACTACTATTCATTAACCTTCAATTGTGAAGGTTCTTCTGTGATATTTGAAGTCCCTCATGTGAATGGTGGTAAATTGGAGTCAATGATGCTATGCATTGTCTTTTCATCTTCCCTGGAAACTGAAATATCAAAATGTCTTCAAGAAGTGTCGATCAAACTTTACACAGAAACCTCCATTGAGGTCTATAACTATAAGTGTAATAGAAAAGACCGTTCTGCAGAATTTTTGGACTGGCAAAGCTTAACTTCAAAACTGGAACCTGGTACAAAGGTGGAAGTCCATGTTATTCCTGGTGTTCGATTCACTGTGAAGAAGTCAGAAATTTATCTTGTGTATAATGCTGCACCAACTTACTTCAATACGGAGAACTGTCAAGCTGATGATATGGCAATTGATGAAAATCCCAATGTTTCTGGTGATGATAATATGGCAACAGAAATAATGGACGATGCTGGTTCCAGTGGGGTTGAAGAGGTAAGTGATGTAATTATAGTTTCTCACACTCCGATCATGCTTTGA 4560 0.3882 MTEGGQEEERHRRGGGELTSQRRGGKGNGVSDDGEDGSRNYKQPRRPFSFFYRRNKCEDITKIVKHVTHHLDMFIVDHPVGVEARVQDLIQLLNCEKSKDVLLLGIWGMGGSGKTTIAKVTCNKLCRDYKGRGIFLQNISEGCKIIPHPTIYKVLKRSFDGLSDSRVENIFLEIACFYIGLDQNEVVQKLNNDFGDSAETVVAALVERCLVTVDKMNKIRMHVLLRNMGIEIFRQRQRMHPEQRIYDVFLSFSKDTPPSFISRLTDSMKKAGMSFYKNDDSLSGDDQISRSLLAVIQKSRIFIIVLSKNYARSTRCLQVLEQVTGYRRIGGQFILPVFLDVDPKDLRLQREFTQAFRDLKENVLDKAAVDRWKIAFARIFQIRSFKFVYEAANGTNRSKDDDVALRVVERAKDLLDKRNLFIVEFPVQVDFHVTEATQLLTHRKSRGALLLGIWGMAGIGKTTIAKAIYNKIGGDFEGRSFLPEMDESKSLVLLIKILKGNFKIVSNTSSQKLVACARGLPLALEILGSGVSSTSDMVNMSLESPHPIVRNVLERCINDLSYLQKSMFLDIACFLIGMDREEVIQALNVHRNLAEDGINTLEDQSLVTFDKQNKIRMNVLLQETARKIVHDNIQSKPQVVVCTMRYKEESWRKALRHIGGIAGIEIIGSRNESEDINRIVEHITGFLGKTFFFVAQHPVGVNSRVDHVVKLLNHRRSKDVEVLGISGIGGVGKTTIAKAIYNQIHRDFEACCCLLDIREKWKQITCQVDLQNQLLSDVYTTTKIKIRDIELGKTILKERLQHKRILLILDDVDDLSQLTALCGSRKWFGQGSRIIITTRDEGLLRILKVDHVSRMSEMDDDESIEHFSWHAFKKASPQEDFAQISRDVAAYCKGLPLALEVIGSLLFDKEIEEWQSVLEKLQIIPNRQVQKKLRISFDSLSDDTEKEIFLDIAFFFIGMDQNDVLHILDGANHPSVGIKTLKDRCLVTIDNNNKLGMHDLLRDMGREIVREESIKEPEKRSRLWLQKDGTRAVEGLALKLTRNNTVCFKTEAFKEMHRLRLLQLASVQLDGNFEYLSQELRWLNWHDFPLKYMPPNFYQEGLAAIELESSCLTQLWTEDKLLVKLKFLNLSHSHHLTQIPNVSYLPNLEKLLLKDCPNLTMIPDTIGDLKKILLINLEDCTSLSNLPRSFYRLESLETMIISGCSKIDKLEEELEQMKSLVNLIANRTSITKVPYSTIRSKSVRYISICGYEGFSRDVFPSLIWNWMSPTNILSFSTLIQTSACPEFVPMDVIIKLHSLRRSKNKQGVKRVLDILDAAYCKQVEAKQTASQKLTASGPDDCLLSSDNYYSLTFNCEGSSVIFEVPHVNGGKLESMMLCIVFSSSLETEISKCLQEVSIKLYTETSIEVYNYKCNRKDRSAEFLDWQSLTSKLEPGTKVEVHVIPGVRFTVKKSEIYLVYNAAPTYFNTENCQADDMAIDENPNVSGDDNMATEIMDDAGSSGVEEVSDVIIVSHTPIML 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01889 1519 MobiDBLite consensus disorder prediction 1 42 - -
Adu02g01889 1519 ProSiteProfiles TIR domain profile. 244 392 IPR000157 GO:0007165
Adu02g01889 1519 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 49 133 - -
Adu02g01889 1519 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 49 133 IPR044974 GO:0006952
Adu02g01889 1519 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 647 1457 IPR044974 GO:0006952
Adu02g01889 1519 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 255 489 IPR044974 GO:0006952
Adu02g01889 1519 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 502 637 - -
Adu02g01889 1519 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 141 244 - -
Adu02g01889 1519 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 647 1457 - -
Adu02g01889 1519 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 255 489 - -
Adu02g01889 1519 SUPERFAMILY "Winged helix" DNA-binding domain 150 247 IPR036390 -
Adu02g01889 1519 Gene3D - 240 418 IPR035897 -
Adu02g01889 1519 SMART till_3 245 382 IPR000157 GO:0007165
Adu02g01889 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 691 952 IPR027417 -
Adu02g01889 1519 Gene3D - 857 941 IPR042197 -
Adu02g01889 1519 MobiDBLite consensus disorder prediction 28 42 - -
Adu02g01889 1519 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 502 637 IPR044974 GO:0006952
Adu02g01889 1519 SUPERFAMILY Toll/Interleukin receptor TIR domain 239 360 IPR035897 -
Adu02g01889 1519 SMART AAA_5 719 859 IPR003593 -
Adu02g01889 1519 SMART AAA_5 100 324 IPR003593 -
Adu02g01889 1519 SMART AAA_5 447 672 IPR003593 -
Adu02g01889 1519 PRINTS Disease resistance protein signature 1191 1207 - -
Adu02g01889 1519 PRINTS Disease resistance protein signature 892 906 - -
Adu02g01889 1519 PRINTS Disease resistance protein signature 799 813 - -
Adu02g01889 1519 PRINTS Disease resistance protein signature 722 737 - -
Adu02g01889 1519 MobiDBLite consensus disorder prediction 1 19 - -
Adu02g01889 1519 Pfam NB-ARC domain 704 927 IPR002182 GO:0043531
Adu02g01889 1519 Pfam NB-ARC domain 432 481 IPR002182 GO:0043531
Adu02g01889 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 571 IPR027417 -
Adu02g01889 1519 Gene3D - 693 852 IPR027417 -
Adu02g01889 1519 Gene3D - 61 170 IPR027417 -
Adu02g01889 1519 Gene3D - 419 519 IPR027417 -
Adu02g01889 1519 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 141 244 IPR044974 GO:0006952
Adu02g01889 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 158 IPR027417 -
Adu02g01889 1519 SUPERFAMILY L domain-like 997 1276 - -
Adu02g01889 1519 Coils Coil 1207 1227 - -
Adu02g01889 1519 Gene3D Ribonuclease Inhibitor 1028 1339 IPR032675 -
Adu02g01889 1519 Pfam TIR domain 246 378 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01889 Adu-Chr2 79902916 79915915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01889 485 637 WRKY Transcription Factor Family AT4G12020 29.560 3.44e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01889 - - ahf:112749643 1647.48