Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01885 ATGGAAAGGGGGGAGGTACTGGAAACACTAAATTATGGCTTTGGAATTAGCGAACATGGAATTAGTTTCCTTGAAGAGCGGAGTCTTATAACATTTGATGAGAAAGATAGAGTTCGAATGCATCCTTTGCTGCGAGACATGGGAAGAGAAATCGTTCGAGAGCAATCACAAACTGATGATCAGCGAAggacatcagtggaagaagataaggtgcaaagttggagaACAGATCTTCGTGAAGTTAGTAGCTTTTCAGGGATGACTGTGATCAACTCCAGGAACAAAAGTGAAGATATCAAAAGAATTGTTGAACACGTTACTCGGTTGTTAGATAAGACAGAGTTGTTCGTTGCAGCGCATCCAGTGGGAGTAGAACCTCGTGTGCAAAAGTTGATTGAAGAATCAAACATTCAAAAGACAAAAGATGTTCTGATACTTGGGATAAAGGGCATGGGGGGCGTTGGTAAAACCACTATTGCCAAAGCCATCTATAACAAAATTGGTCGCGATTTTGATGGCAGGAGTTTCCTCCTGAACATTAGAGAAACATGGCAGCAAGATAACGGAAAGGTTCTCTTGCAACAGCAACTTCTTGAGGATATATTCATTGCAACAAGGATACACATACGTAACATTGATTCAGGGATGCAAATATTAAAGGAAAGGCTTGGTGCTAAAAGGGTACTCATTGTGCTTGACGATGTAACTGATTTGTACCAACTCAATGCTTTGTGTGGTAGTGGTGAATGGTGTGGTCCTGAAAGCGTAGTAATCATCACAACAAGACATGATGATCTTCTTCGAGTGTGTAAACACACATTCAATCTAGAAGAGATGAATGGGGCTGAATCCCTTGAGCTTTTTAGCTGGCATGCATTCAAACAAGCATGTCCAAAAGAAGAGTTTGCCAAGCTATCTACAGATGTAGTTGAATATTCTAATGGATTGCCACTGGCTCTGGAAGTTCTTGGCTCCCATTTGTTTAATATGGGAATAAAAGAGTGGCAAAGTGCATTGAATACTCTGAAATTAATTCCCCATGATAAAGTCCAGAAGAAACTACAAATAAGTTTTGATGGTTTAAGTAAGAATTATGAAAAGGAAATATTCCTTGACATTGCATGCTTTTTTATTGGGATGGATCGGAATGATGTTGTGAAGATATTAAATGGTTGCGGGTTCCATGCAGAAATTGGAATCAGTGCACTTAAAGAGCGAAACCTTATAACCGTTGATAACAATAATATGCTTGGAATGCATGACTTGTTAAGAGATATGGGAAGAGCAATAATTTGTGAGCAATCACCTGAGCTTGAAAAGCGAAGTAGATTATGGTACGATGAGAAAGTGCTTGAACTATTAGAGAATCATGAGGGAACAGATTTAAAGGCTAAGGGATTGAGTTTGAAGTTGCCTATGACCAATTCCATTTGTTTGAGTAAAGAAGCATTTAAGAGTATGACTAAACTTAAATTGCTTCAACTCGCCGGTGTACAACCTAATGGAGAGTTCAAACATGTTTCAAGATATCTTAGATGGATGAGTTGGCATGGATTTCCTTTGAGACACACTCCCAAAGACTGCTATCAATCAAATATAATTTCCATTGAGTTAGAAAACAGCAAACTCAAACTTCTGTGGAAGGAGTCCCGGTTGTTGAAACAGCTGAAGATTTTAAATCTTAGTCATTCACATGACTTGATCAAAACCCCAGATTTTTCATACCTACCTAATCTTGAGAAGTTAGTACTCAAGGATTGTACAGAATTGTCTTCGGTTTCCTATACCATTGGAACTCTACAAAACATCCTTCATATCAATATAGAAGGATGTACAAACCTTTGTGTACTTCCAAGAAGCATATACAAGTTGACATCTCTTGAAACTCTCATCCTCTCTGGGTGTTCAAAGATTGATAAGTTAGAAGAAGATGTGGAACAAATGGAATCTTTGGCAGTGCTAAAAGCTGATAACACTGCCATAGCACAAGTGCCCAGTGCGGTAGCAAGATTAAGAAACCTTGGACATATTTCTTTGTGTGGCTATGAAGGATTGGCACGTGATGTGATTCCTTTAATTATGTTTTGGTTATGGCCTTCACCAAATAATATGTTGTCATCAGTTATGCAAAAATGTTCATCAAATGTTTTCACTTATGCAAATTGGGGTCCACGGCTTCAGATAAAAGGAGGTGTATCTTTGGATACTGACAATGTGGCAAATTGCAATGAATTGGGGATGCATATTTCTGAATCAAAATCTTCTTTGAATTCCCTTTTGATTCAAATGGGGGTGGAAAACTCAACCACAGAGATACTTCAAAAGACCATTTCACAGAACAATGAGCTTGGAGATTACCTGCTCCCTTATGACAACAATAATCCTGGTTTGTTAACATTCAGTGGTGAAGGTTCCTTTGTGACTTTTCAAGTCCTTCATATGAATGGGCGCAACTTGAAGTCCATGATGTTGCACATTGTTTTCTATTCTACTTCTTCCACATTCATCACTACAACAGAAGGTCTGATTCTTGAAAATGTGCGAATCTTAAATCTCTCAAGGGACAAATCCAATGTATTTAAGGGAGATAAGTTAGCTTCATTAAAAGATGAGGACAGGGAAATCCTAATGTCAAGTCTAGAACCTGGTGACACCGTGCAGATTGTTGTTGCTTTAGGATCTGGGTTCATTGTGAAGAAGACCATAGTTTATCTCATATATGACGATGAACCACCAATTGGGGGAAACTTGGAGCACTTCAATGATGAAGAGGATGATAATGTTCGTTCTACTGGTGATGACGTTGTAGCTTCTGTGAATGAAGGCACTTTGGGTGTTGATGTCATTGCAGCAGATGATGACGAAGATGTTACTGTTTTTGGTGTTCATGATGCAGTAGCTGGTATGAATGAAATTGTTTCTGGTGTTGATGCTATGGAAGAAGATAAGGATGGTGCTACTGTTGCTAATGTTGATGATGATATGGTAGCCAATCTGGATAGAAATGCTTCTACTTCTGGTACTGATATCATGCCACCAATTACTAATGGTTTTGGTGCTAATTATGTAGTAGCAACTGATATAAATGAAAGTTCTTCGAGTGTTGATGATAATAATGACGATGATGTTGCTGCCATTGGAGATAAAATGACAGGACTTATTCCCTTAGTTCAGGTCCCTCTTGATGCTAATATATATTCTGAGCTTACATTGACTATGATGGTTTCAGAAGATGAGCTTCATGAAGATAGTGATTTGCTTATTGCAGAGTTGGATAAAACATTGTCAGAGAGCTACTTTCTGTACCCTAGTCCTGGATCATTAGAACTTCAAAGTCTCTCTCTGATTTCAATCTTTCAAAAAATGCAACTTCTTTTGGATAATGAACTAGAAGCCTTGGTAGGAGATGTTAACATCAAGAATCAGCTTCTCGGCTATGTGGCTCAATTAGGTCAAATAATAGAGTCATCACAAGTTCCTAAAGATCTTCACTCTTTGGTTATTGAGATTAGTCATTTCTATGAAGATTTTCTCAATGATTTTCCACCTGTTCAAGAAGTGTTAGACAATCATCAAAGATTGATCGACTCAAAGAATGGACTTCAAGAGAAGTTAAAAGCGGCTAAGGCCAAACAAGGACAGTTTTCTGCTTCAATTTCTAAAGGAAAAGAAAGGGTCAATGAGACGTCAAAAGAAATCAATGAATTGGAGTCAAAACTAAAAGCCTTGCATGAGAAGAGGAATAGGTTACAATTCAATGTGAAACGTTGTGAGTTTGAATCTATAAACATCAATAAGAATTTGGAAACTTTGATAAAAGAGAATGAAGAGGTTGTGAGCAGTCTCAAAGAATCAGAATCTGCATTCAGAAAGGCTGAGTTGTCAAAGCAGAGTTATGAGAGGAAGCTAGCAGTCTTGAAGCAAGCTCTTTATGGCAACACTAGGCATTAG 3951 0.3774 MERGEVLETLNYGFGISEHGISFLEERSLITFDEKDRVRMHPLLRDMGREIVREQSQTDDQRRTSVEEDKVQSWRTDLREVSSFSGMTVINSRNKSEDIKRIVEHVTRLLDKTELFVAAHPVGVEPRVQKLIEESNIQKTKDVLILGIKGMGGVGKTTIAKAIYNKIGRDFDGRSFLLNIRETWQQDNGKVLLQQQLLEDIFIATRIHIRNIDSGMQILKERLGAKRVLIVLDDVTDLYQLNALCGSGEWCGPESVVIITTRHDDLLRVCKHTFNLEEMNGAESLELFSWHAFKQACPKEEFAKLSTDVVEYSNGLPLALEVLGSHLFNMGIKEWQSALNTLKLIPHDKVQKKLQISFDGLSKNYEKEIFLDIACFFIGMDRNDVVKILNGCGFHAEIGISALKERNLITVDNNNMLGMHDLLRDMGRAIICEQSPELEKRSRLWYDEKVLELLENHEGTDLKAKGLSLKLPMTNSICLSKEAFKSMTKLKLLQLAGVQPNGEFKHVSRYLRWMSWHGFPLRHTPKDCYQSNIISIELENSKLKLLWKESRLLKQLKILNLSHSHDLIKTPDFSYLPNLEKLVLKDCTELSSVSYTIGTLQNILHINIEGCTNLCVLPRSIYKLTSLETLILSGCSKIDKLEEDVEQMESLAVLKADNTAIAQVPSAVARLRNLGHISLCGYEGLARDVIPLIMFWLWPSPNNMLSSVMQKCSSNVFTYANWGPRLQIKGGVSLDTDNVANCNELGMHISESKSSLNSLLIQMGVENSTTEILQKTISQNNELGDYLLPYDNNNPGLLTFSGEGSFVTFQVLHMNGRNLKSMMLHIVFYSTSSTFITTTEGLILENVRILNLSRDKSNVFKGDKLASLKDEDREILMSSLEPGDTVQIVVALGSGFIVKKTIVYLIYDDEPPIGGNLEHFNDEEDDNVRSTGDDVVASVNEGTLGVDVIAADDDEDVTVFGVHDAVAGMNEIVSGVDAMEEDKDGATVANVDDDMVANLDRNASTSGTDIMPPITNGFGANYVVATDINESSSSVDDNNDDDVAAIGDKMTGLIPLVQVPLDANIYSELTLTMMVSEDELHEDSDLLIAELDKTLSESYFLYPSPGSLELQSLSLISIFQKMQLLLDNELEALVGDVNIKNQLLGYVAQLGQIIESSQVPKDLHSLVIEISHFYEDFLNDFPPVQEVLDNHQRLIDSKNGLQEKLKAAKAKQGQFSASISKGKERVNETSKEINELESKLKALHEKRNRLQFNVKRCEFESININKNLETLIKENEEVVSSLKESESAFRKAELSKQSYERKLAVLKQALYGNTRH 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01885 1316 Coils Coil 1191 1211 - -
Adu02g01885 1316 PRINTS Disease resistance protein signature 222 236 - -
Adu02g01885 1316 PRINTS Disease resistance protein signature 145 160 - -
Adu02g01885 1316 PRINTS Disease resistance protein signature 622 638 - -
Adu02g01885 1316 PRINTS Disease resistance protein signature 313 327 - -
Adu02g01885 1316 SUPERFAMILY "Winged helix" DNA-binding domain 348 455 IPR036390 -
Adu02g01885 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 373 IPR027417 -
Adu02g01885 1316 Coils Coil 1219 1253 - -
Adu02g01885 1316 Gene3D Ribonuclease Inhibitor 386 695 IPR032675 -
Adu02g01885 1316 Coils Coil 638 658 - -
Adu02g01885 1316 Gene3D - 112 277 IPR027417 -
Adu02g01885 1316 Gene3D - 22 111 IPR035897 -
Adu02g01885 1316 Coils Coil 1265 1309 - -
Adu02g01885 1316 Pfam NB-ARC domain 129 348 IPR002182 GO:0043531
Adu02g01885 1316 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 8 59 - -
Adu02g01885 1316 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 67 907 - -
Adu02g01885 1316 SUPERFAMILY L domain-like 469 825 - -
Adu02g01885 1316 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 59 IPR044974 GO:0006952
Adu02g01885 1316 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 907 IPR044974 GO:0006952
Adu02g01885 1316 Gene3D - 279 362 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01885 Adu-Chr2 79845299 79851011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01885 142 639 WRKY Transcription Factor Family AT5G45050 32.068 9.07e-70 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01885 - - ahf:112727946 2082.37