Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01883 ATGGATCAAGAAGAGGTGATCCAAGCATTAAATGCCTTTGGAGACTTGGCCAAAGATGGAATAAAAGCCCTTGAGGATCGATGCTTTATAAGATTTGATGACATGAACAAACTTAGAATGCATGTTTTGCTACGAGATATGGGAAGAGAAGTCATTTGTGAGCAAAAGGGAGGAGATCCTGCGtcatggatctatgatgtgttcttgagttttagaggagaagaaactcgtgcgacattcacctcacatctctacacttctcttgcaaatgctggaatttatgtctttagggatgatgacgagatccggaggggagatcgaatctccatttcactactgcaagcaatcagagcatctagaatttctgtagttgtgttgtcaaggcattatgcaaattcaaggtggtgtctgcaagagctggagaacataatggagtgtcgcagggccataggtcaggtggttgtgcctgttttttatggtgtagatccctctaatgtaaggaatcaaacaggtctatttggagaagcttttcaagatcttttaaaaagattttcagtggatagagacaaggagaagaggtggagaaaagcgcttcatcaaattgGTTCCATTGCAGGAATTGTGATCATAGATTCCAGGAATGAAAGTGAGGATGTCAGTTTGATTGTTGAAGATATCTCTGCTTTGCTAGATGATACACTCTTATTTGTTGCACAACATCCCGTAGGTGTAAAATCTCGTGTGCAGCATGTGATTAAACTACTAAACCACCAATATGCAAAAgatgttcaactgtttggaatattgggaattggaggaatcggaaaaacaaccattgccaaagccatttacaatcaaattcatcgtgattttgagggttcttccttcctcgagaatattagggaattctgggaactaataactgctcgagttaatttacaagaacaccttctttctgacatctacaaaacaacgaaaataaggatacatagcattgaatttggaaaaactatattgcagcaaaagcttcgtcatagaagggtgcttgttatacttgatgatgttgatgaactagaccaactaaaagctttgtgctggagccgtgaatggtttggtccagggagtagaataatcatcacaacaagagatgaaagtctacttagagtgcttaatgttgaccacatatctagaatgtcagaaatggacaatgatgaatctgttgagcatttttgttggcatgcattcaaacaatcaagtcccaaagaggattttgctgagctttccatagatgtagttgcatactgtggaggattgccactagctcttgaggttattggatctgttttgtttgataagaatgtaaaagagtgggaaagcctattggaaaaactaaaaaaaattccaaatgataaagtacagaaaaagctaagaataagttttgacagtttaaacgatgatacagtaaaagaaatattccttgacatagcttttttctttatcgggatggatcggaatgatgtagtgcatatcttggatgaatatgatgctgaaattggAATAAGTGTTCTTGTTGATCGAAACCTAGTGACTGTTGATAGCAATAATCGGCTTGGAATGCATGCCTTGTTGCGTGATATGGGAAGAGAAATAGTCCGTGAGAAATCACCCAAAGAGCTTGAGAGGCGAAGCAGATTATGGTTGCAAAAAGAAGTATTTGAAGTATTACAAACACATACTGGTACAAAAGCTATTGAGGGACTAACTTTGAAGTTGACAAGAACTGATACAATTTGTTTGAAGACTGAAGCATTTAAGGAGATGAAGAAACTCAGATTGCTTCAACTTGCAGGTGTACAACTTGGTGGAGATTTTGAATATATTTCAAAAGATCTAAGATGGCTTTACTGGCATGGATTTCCTTTGAAATATATGCCTTCAAACTTTTCTCAAACAAGCTTAGTTTCCATTGACTTAGAATCTAGCAGTCTCAAATTAGTGTGGAAAGAGCCAAAGTTCCTTGAGAGGTTAAAAATTCTCAATCTTAGCCATTCTCAGCACTTGACACAAACCCCTAACTTCTCATACTTGCCTAATCTTGAAAAGCTGTTACTCAACGACTGTCCACGTTTGACTGCAATTTCAGAAACCATTGAACATCTCAAATACATTCTTTTGATCAATTTGGAAGATTGCACAAGCCTTCATAACCTTCCAAGAAGTTTCTATAAGTTGAAATCTCTTAAAACTCTCATTATTTCGGGATGCTCAATGATTGATAAATTGGAAAATGATTTGGACCAAATGGAATCCTTGGTAACTTTGATTGCAGACAAGACTGCAATAACACAAGTGCCATTTTCAATAGTAAGATCAAAAAGCATTGGATATGTTTCTTTGTGTGGTTATGAAGGATTCTCACGTGATGTGTTTCCTTCTCTCATTTGGTCATGGATGTCACCAACAAATAATTTCTCATCTCAAGTTGAAACATGTATGGATTTGGAACTTGTTTCCTCAGATGTAGGAAAGCTTCGAAGTTTGCAAGTGGAATGCAACTCAGATTTTCAACTAGCTGAAGGTATTGCAAGAATTTTGGACACTCTATATGCAACATATTACAATGAATTAGAAGCAACACCAACTACATCACAAGTCTCAAACATGGGAAGTTCATCCATAATTAGTATTTGCAATCAATTTCAAATGAATGGATTAGTCAAGTCTCTTCTAGTTGAAGTGGGAGTCAAGAACCAAGTCAGCAACATTCTTAGGGAGAGAGTTTTTCAGAAATTGAGCACCAATGAGCATGACAATTATTTGTTGCCGGGTGACAATTATCCTGATTGGTTGACCTTCAATTCTGATGGTGCTTCTATAATTTTCAATGTCCCTCATGGGAATGGACGTGACTTGAAGACAATGACAATGTGCATTGTGTATTCTTCTTCTACAGACACCATCTCACTAAAATGTCTCAAGAATGTGTTGATAATAAATTACACAAAATCTACCATTCAAGTGTATAAGTGTGACACAATAGCTTCTCTTGAAGATGACGAGTGGCAAAGCATAATTTCAAGTTTGGAACCCGGAGACAGAGTTGAGATTGTGATTGTTGTTTATGGGACAGAATTTGTTGTGAAGAAGACATCAGTTTATCTCATATATGGTGAACCAAATAATGAAGATAGGGATGCTACCGATATGCCAGAAGATAAGAATGTTATTAGTTTCGGCAAAGCTAAAAATTACAAACCATTTTCTTTACTTCTTTGTGAGCTTAGAGATTTCGTGGACCTTTGTCTCTCGCCTCCGTTCTGGTCTCGCCGCTGTTCTGGATTGGCGTCGCTGGTTTTCTAA 3360 0.2417 MDQEEVIQALNAFGDLAKDGIKALEDRCFIRFDDMNKLRMHVLLRDMGREVICEQKGGDPASWIYDVFLSFRGEETRATFTSHLYTSLANAGIYVFRDDDEIRRGDRISISLLQAIRASRISVVVLSRHYANSRWCLQELENIMECRRAIGQVVVPVFYGVDPSNVRNQTGLFGEAFQDLLKRFSVDRDKEKRWRKALHQIGSIAGIVIIDSRNESEDVSLIVEDISALLDDTLLFVAQHPVGVKSRVQHVIKLLNHQYAKDVQLFGILGIGGIGKTTIAKAIYNQIHRDFEGSSFLENIREFWELITARVNLQEHLLSDIYKTTKIRIHSIEFGKTILQQKLRHRRVLVILDDVDELDQLKALCWSREWFGPGSRIIITTRDESLLRVLNVDHISRMSEMDNDESVEHFCWHAFKQSSPKEDFAELSIDVVAYCGGLPLALEVIGSVLFDKNVKEWESLLEKLKKIPNDKVQKKLRISFDSLNDDTVKEIFLDIAFFFIGMDRNDVVHILDEYDAEIGISVLVDRNLVTVDSNNRLGMHALLRDMGREIVREKSPKELERRSRLWLQKEVFEVLQTHTGTKAIEGLTLKLTRTDTICLKTEAFKEMKKLRLLQLAGVQLGGDFEYISKDLRWLYWHGFPLKYMPSNFSQTSLVSIDLESSSLKLVWKEPKFLERLKILNLSHSQHLTQTPNFSYLPNLEKLLLNDCPRLTAISETIEHLKYILLINLEDCTSLHNLPRSFYKLKSLKTLIISGCSMIDKLENDLDQMESLVTLIADKTAITQVPFSIVRSKSIGYVSLCGYEGFSRDVFPSLIWSWMSPTNNFSSQVETCMDLELVSSDVGKLRSLQVECNSDFQLAEGIARILDTLYATYYNELEATPTTSQVSNMGSSSIISICNQFQMNGLVKSLLVEVGVKNQVSNILRERVFQKLSTNEHDNYLLPGDNYPDWLTFNSDGASIIFNVPHGNGRDLKTMTMCIVYSSSTDTISLKCLKNVLIINYTKSTIQVYKCDTIASLEDDEWQSIISSLEPGDRVEIVIVVYGTEFVVKKTSVYLIYGEPNNEDRDATDMPEDKNVISFGKAKNYKPFSLLLCELRDFVDLCLSPPFWSRRCSGLASLVF 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01883 1119 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73 1054 IPR044974 GO:0006952
Adu02g01883 1119 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 60 IPR044974 GO:0006952
Adu02g01883 1119 ProSiteProfiles TIR domain profile. 63 230 IPR000157 GO:0007165
Adu02g01883 1119 Gene3D Ribonuclease Inhibitor 580 803 IPR032675 -
Adu02g01883 1119 Gene3D - 400 484 IPR042197 -
Adu02g01883 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 495 IPR027417 -
Adu02g01883 1119 PRINTS Disease resistance protein signature 265 280 - -
Adu02g01883 1119 PRINTS Disease resistance protein signature 342 356 - -
Adu02g01883 1119 PRINTS Disease resistance protein signature 742 758 - -
Adu02g01883 1119 PRINTS Disease resistance protein signature 435 449 - -
Adu02g01883 1119 SUPERFAMILY L domain-like 588 880 - -
Adu02g01883 1119 SMART till_3 64 204 IPR000157 GO:0007165
Adu02g01883 1119 Pfam TIR domain 65 226 IPR000157 GO:0007165
Adu02g01883 1119 Gene3D - 234 395 IPR027417 -
Adu02g01883 1119 Pfam NB-ARC domain 247 476 IPR002182 GO:0043531
Adu02g01883 1119 Coils Coil 758 778 - -
Adu02g01883 1119 SUPERFAMILY Toll/Interleukin receptor TIR domain 60 206 IPR035897 -
Adu02g01883 1119 Gene3D - 60 233 IPR035897 -
Adu02g01883 1119 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 73 1054 - -
Adu02g01883 1119 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 4 60 - -
Adu02g01883 1119 SUPERFAMILY "Winged helix" DNA-binding domain 470 576 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01883 Adu-Chr2 79714823 79779654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01883 45 788 WRKY Transcription Factor Family AT4G12020 30.829 1.88e-82 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01883 - - ahf:112749677 1736.47