Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01882 ATGTCGTCAACGGCGTCATCTTCTTCACAAAAGAAAGAACCCGGACTCATGAAAttcactacttcctactatcgaaactggacctacgacgtgtacgtgtgcttcgaccgtaccaccaacaaattcgtctcggatctctatgcaaggctcagcgctgcaggggttcgcgtcttcaaggacgaaatggagccccgaagcggagaccagatcctgttcaaggcaatcgaagattctagaatctccatcgtggttttctccagaagctatggggattcgacgtggtggttgaaggaattggagaagataatggagtgtcggagcagcaagggtcagaaggttgtgccggtgttctacggtgttgatccgtcggaAGCTGGGGCGGCGTTCGCATACCGGGAACCGCTCAGGGAAGCTGCTTGCCTTCCGGGCTTTGTTACATATATCAGCAGGGAGAGAGATGAAGCCTTAGACAATATTGTTGAACATATTACTGCCTTTTTAGGTGGTAAGGATCACTGGTTCACTCTGCCGAATGTAGAGAAATTGCAACCTCGGGTGCAGGATTTAATTCAAGTTCAACTGTTGAATTATGATAAAGTTTTAATACTTGGGatatggggaatggcaggcattggtaaaacaaccattgccatggctctttataatcaaatctgttacagattccagaggaggatgtttgttgacaatatcagcgagagatgtgagCAGCATAGTATAGTTTCTTTACAGGAAGAGCTTTTTTCTTGTATCTGCAAAACAACAGAAGAAACAAAAGAAGAAGCAACGAAAGAAGCAAAGGAAAAAGCAACAAAAGAAACAACAGAGGAAACAACAAAAGCAGCAGTGGAAGAAGTAACAGAAGAAGCAACGGAAGAAGAAAGGGAAGAAACTACTGCAGAAAAAGCAAAGATTCATGACATTGAATCAGGAAAGCTGTTATTAAAGAAAAATCTCAGCAATaaaaaaactcttcttgttctagatgatgtgactgaacgagaccatttagaggctttgtgcggaagtcgcgagtggtttggtcctggaagcacaataatcatcaccactagggataggagtatgctcaaggacgctgatgatatatatacagtgaaaggaatgaattatgatgaatctattgagctattttgttggcacgcattcaagaataaggaaattcctgcagaagagtatcgcgaacatgcagaatctatagttgagtattgtgggggagtaccactttttcttgaagtagctggatcccatttatatggaaagatgatagaagagtgggagcctgcattggaagaacttgaggaaaatcctccttataaattgcagaggtttcgacaagtgagctttgatagtttaagagatgactcactgaagaagatatttcttgatatagtttgtttctttgttggtatgaaccggaaccatgttgtgaaaatattgaatggcactggacataatggagaaaAGGCCTTAACTGCCCTTGAAGATAAATGTTTAGTAACTGTTGATGGCAACCGGCTTCAAATTCATACCTTGATAGAAGAAATTGGAAGAGAAATTGTTGATGAGGAATCACGTCTTACTCCCAAGCTAAGTacctatgatgtattcttgagtttccgaggaaaagatactcgtgcaacattcacttcacatctccatgcggctctcgaaaatgctggattttatgttttcaaggatgatgttcaacttccaaggggagaatggatatcaatctcactactggaagcagtgaaagactccagaatgtctattattgtgctgtctacaaattatggtggttcaaaatggtgtctggaagagttagagaatataatgcagcttcaaagaaccacagctcacgcagtcgtgccaatattctacagtgtagatccctccgaagtacgtcaccaaagtggtgtatttggacaaaaatttaatgatcttttaagaagtcacccagtggaggaagacaaggagaaaagttggaggacatcactccgtcaagttggtagtctttcaggAATTGTTGTGGTAAATTCCAGGAATGAGAATGAGGATATCAAGAAGGTTGTTGAAGATGTTACTCATTTGCTTGACAAGACAGAATTGTTTGTTGCAGACTATCCGGTGGGAGTAACATCTCGTGTGCAAAATGTGATCAATCTATTGATTGAACAACAATCAAAAGATGTTTTACTTCTTGGGATATGTGGCATGGGAGGACTTGGTAAAACAACCATTGCCAAAGCTCTTTATAATCAACTTAGTCGCAAATTTGATTGCAAGTGCTTCCTACTAAACATCAGGGAAGTTTGGGAGCAAGATAATGGTCAAGTTTCTTTACAAGATCGTCTCCTTTCTGATATTTACAAAACAACAAAGATACCGATACGTACCACTGAATCAGGAAAACTTGAATTGAAGAATCGACTTTGCCAcaaaagggtacttcttgttcttgatgatatagataaagtggagcaaatgaatgcattgtgtggaagtcatgaatggtttggttccggaagctgtataatcatcacaacaagagatgagcatctggttaaaatgcgtggcattgaacctataatttatagattggatgaaatggatgatagtgaagctattgagctttttagttggcatgcattcaagcaagcatatccagacacaaatttttctgtccttactaaagatgtagttgcatattcttctggactgccacttgctcttgaagttcttgggtcctatttgtgtgatagggaaatcgaagtgtggaagaatgctttggagaaacttaaaaggattcccaatcataaaatacaggagaagctaagaataagttttgatagtcttagtgatgatactgagaaagagatatttcttgatatagcatgctttttcattgggatggaccgaagtgatgttattcagatattaaatgattgcggacttttcgctgaaattggaatcagtgtccttagagagcgaagccttgtaactgttgacagcacaaacaagcttggaatgcataatttgctaagggacatgggaagagaaataattcgcgaggaatcaccagatgaacctgagaagcgtagtagattatggcttcatgaggaagtccttcatgtattaacagaatacaagGGAACTACAACTATCACAGGACTGGCTTTGAAGTCACCAAGGACGAATCCAATTTCATTAAGCACAAAGGCATTTGAAGAGATGAATAAACTCAGATTGCTTCAGCTCGAAAAAGTACAACTTGATGGAGATTTCAAATATATTTCTAGAGATCTTAGATGGATGAGTTGGCATGGATTTCCTTTGAGTCACATTCCTAAAAGCTGCTGTCAGAAAGGTTTAGTTGCCATTGAGTTGGAATATGGCAATCTCAAAATAGCATGGAAGCAGGCTCAGTTGTTGAATAAGCTGAAAATTCTGAATCTCAGTCATTCTCATCAATTGAGAGAAACTCCAGACTTTTCATACTTACCTAACCTTGAAAAGCTAATACTCGAAGATTGTTCGAGTTTGTCTTCGGTTTCCCATACCATTGGACATCTCAATCAACTTCTTCTGATAAATCTGAAAGATTGTAAAAGCCTTCGTAGCCTTCCGCGAAGCATCTATAAGTTAAAGTCACTCAAAACTCTCATTCTTTCTGGATGCTTAATGATTGACAAGTTGGAAGAGGACATGGAACAGATGGAATCTTTGACAACCTTGAAGGCAGAAGACACTGCTATAACACAAGTTCCGAATGCACTAGTAAGAATGAAAAATATTGGTTACATATCTTTGTGTGGCTTTGAAGGATTGGTTCGGGATGTTCTTCCATCTATCATTTGGTCATGGACCTATCCAACAAATAATGTGTCATCTCTGTTTCAAAATACTCTCTATCATCTATCATCTATGATCAGCAAACTTCCAAAGCGTAGTAGTCTTTTGTTGGAATCCGGTCTGCAACTTGAGATACCTGAAGATGTGGTCTTGAAAAGCTTAGATGCTACAAATTGCAAGATAACTAATCTTGATGAAAATGCTTCCGTCGATGATATCACAGAAGATGAGAATGTGACTGTTTTGGATTCTGATGATATGGAGACCGATATGAATGAAAATGTTTCTGATTTTGAAGATATGGCAGTTGACAGAAATGCTGTTGTTTCTGATATGCTAACAGATAAAAGCATTGATATCATTTCCAATGGAGGTGAAAGTAGAATTAGCAGATTCTCCAGACTTCGTTCTCTTGTTCATGTTCTTCTAAAGGCACGACTATTTTGGTTTGGTTTTATTGCTGTCCTAATTTGGATCACATGCAGTTACTCTGAAAATCAAGAATGTTCAACCTCATTTCAAGTATGTCAGCACACACCCACTTTTAAGGAAGCAGAGGTAATTCCCAATAAGCAAGTAGTGAAGTTGTTAGAAGAGGAAAGTAAAAGAAAGAGTAAACTCTCATATAGTGGAAGAGTTGTGGAGCCTCCGCCGGAAAGTAAAAACATCGAAGCATCGGCAACCATCGAGAACTCCAGGCCAAAGTCTAAAGGAGATATGCCTTTAGTTAAGACATATCCACCTGCAATTGCTTCATTATCTAACTCTCAAGAGATGTCAGACAATTCAGAGTATGATAGCAATACTCAAAATCAAGATGAACTGCTTCAGACTCTTTTTGCTTCAAATCCTAAAGATGATGAACTTGCATTGATTGCTGATCCTACATCACTAATCACCACTCAAGAAGACAATGATTTGCTTGCAGAACTAGAACAAATCTTGTCAGAGAGCTATGTCTTGTCCGCGAATAAGGTCGCTTCTGCTACTTCTGTTTCAGAACTTCAAAGTCTTCCATTGATTGCAGTCATTCAAAAAGTACAACTACTTTTGGATAATGAAGTAGAAGCTTTGGTAGCAGATAATGACATTAGAAAACAGCTTCTTGACTACTTAGCTCATCTGGTTCAAATGAATTCACAAGTCCCTACAAATATTCAGAAGTTGGTCAAGGAGATTAAGGAATTTTATGAAGGTTTTCTTGGTAACTTTCCACCTATTCAAGAAGTCTTGGACAATCATCAAAGGTTAATTGACACTAAGAATAGACTTGAGGGGGAGCTGGAAATAGCCAAGGCAAAGCAGGCTCATTTTTCTACTTCAATTTCTAAAGGGAAAGTGAGGATGAATGAGATGTCAAAAGAGATCAATGAGTTGGAGGTGAAACTGAAAGCCTTATATGACAAGAGAGACAAATTAAAATCCGCTGTGAAACTTTGTGAGGTTGAAACTATAAACATCAATAGGAAAGCTGTCACTTGGGTGAAAGAAACTGAAGAGGTTGTGAGCACTCTTAAGGCTTCAGAGTCTGCCTTCAAAAATGCTGAATCTTCAAAACATAATTATGAGAGGAAGCTAAGTGAATTGAAGCGAGCTCTTGGCAAAATTAAACATTAG 5508 0.2364 MSSTASSSSQKKEPGLMKFTTSYYRNWTYDVYVCFDRTTNKFVSDLYARLSAAGVRVFKDEMEPRSGDQILFKAIEDSRISIVVFSRSYGDSTWWLKELEKIMECRSSKGQKVVPVFYGVDPSEAGAAFAYREPLREAACLPGFVTYISRERDEALDNIVEHITAFLGGKDHWFTLPNVEKLQPRVQDLIQVQLLNYDKVLILGIWGMAGIGKTTIAMALYNQICYRFQRRMFVDNISERCEQHSIVSLQEELFSCICKTTEETKEEATKEAKEKATKETTEETTKAAVEEVTEEATEEEREETTAEKAKIHDIESGKLLLKKNLSNKKTLLVLDDVTERDHLEALCGSREWFGPGSTIIITTRDRSMLKDADDIYTVKGMNYDESIELFCWHAFKNKEIPAEEYREHAESIVEYCGGVPLFLEVAGSHLYGKMIEEWEPALEELEENPPYKLQRFRQVSFDSLRDDSLKKIFLDIVCFFVGMNRNHVVKILNGTGHNGEKALTALEDKCLVTVDGNRLQIHTLIEEIGREIVDEESRLTPKLSTYDVFLSFRGKDTRATFTSHLHAALENAGFYVFKDDVQLPRGEWISISLLEAVKDSRMSIIVLSTNYGGSKWCLEELENIMQLQRTTAHAVVPIFYSVDPSEVRHQSGVFGQKFNDLLRSHPVEEDKEKSWRTSLRQVGSLSGIVVVNSRNENEDIKKVVEDVTHLLDKTELFVADYPVGVTSRVQNVINLLIEQQSKDVLLLGICGMGGLGKTTIAKALYNQLSRKFDCKCFLLNIREVWEQDNGQVSLQDRLLSDIYKTTKIPIRTTESGKLELKNRLCHKRVLLVLDDIDKVEQMNALCGSHEWFGSGSCIIITTRDEHLVKMRGIEPIIYRLDEMDDSEAIELFSWHAFKQAYPDTNFSVLTKDVVAYSSGLPLALEVLGSYLCDREIEVWKNALEKLKRIPNHKIQEKLRISFDSLSDDTEKEIFLDIACFFIGMDRSDVIQILNDCGLFAEIGISVLRERSLVTVDSTNKLGMHNLLRDMGREIIREESPDEPEKRSRLWLHEEVLHVLTEYKGTTTITGLALKSPRTNPISLSTKAFEEMNKLRLLQLEKVQLDGDFKYISRDLRWMSWHGFPLSHIPKSCCQKGLVAIELEYGNLKIAWKQAQLLNKLKILNLSHSHQLRETPDFSYLPNLEKLILEDCSSLSSVSHTIGHLNQLLLINLKDCKSLRSLPRSIYKLKSLKTLILSGCLMIDKLEEDMEQMESLTTLKAEDTAITQVPNALVRMKNIGYISLCGFEGLVRDVLPSIIWSWTYPTNNVSSLFQNTLYHLSSMISKLPKRSSLLLESGLQLEIPEDVVLKSLDATNCKITNLDENASVDDITEDENVTVLDSDDMETDMNENVSDFEDMAVDRNAVVSDMLTDKSIDIISNGGESRISRFSRLRSLVHVLLKARLFWFGFIAVLIWITCSYSENQECSTSFQVCQHTPTFKEAEVIPNKQVVKLLEEESKRKSKLSYSGRVVEPPPESKNIEASATIENSRPKSKGDMPLVKTYPPAIASLSNSQEMSDNSEYDSNTQNQDELLQTLFASNPKDDELALIADPTSLITTQEDNDLLAELEQILSESYVLSANKVASATSVSELQSLPLIAVIQKVQLLLDNEVEALVADNDIRKQLLDYLAHLVQMNSQVPTNIQKLVKEIKEFYEGFLGNFPPIQEVLDNHQRLIDTKNRLEGELEIAKAKQAHFSTSISKGKVRMNEMSKEINELEVKLKALYDKRDKLKSAVKLCEVETININRKAVTWVKETEEVVSTLKASESAFKNAESSKHNYERKLSELKRALGKIKH 1835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01882 1835 Coils Coil 258 278 - -
Adu02g01882 1835 Gene3D - 380 471 IPR042197 -
Adu02g01882 1835 Pfam TIR domain 29 125 IPR000157 GO:0007165
Adu02g01882 1835 Pfam TIR domain 546 708 IPR000157 GO:0007165
Adu02g01882 1835 Gene3D - 882 966 IPR042197 -
Adu02g01882 1835 Gene3D - 718 873 IPR027417 -
Adu02g01882 1835 ProSiteProfiles TIR domain profile. 544 711 IPR000157 GO:0007165
Adu02g01882 1835 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 554 1391 - -
Adu02g01882 1835 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 34 540 - -
Adu02g01882 1835 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 476 IPR027417 -
Adu02g01882 1835 PRINTS Disease resistance protein signature 746 761 - -
Adu02g01882 1835 PRINTS Disease resistance protein signature 823 837 - -
Adu02g01882 1835 PRINTS Disease resistance protein signature 917 931 - -
Adu02g01882 1835 PRINTS Disease resistance protein signature 1155 1171 - -
Adu02g01882 1835 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 554 1391 IPR044974 GO:0006952
Adu02g01882 1835 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 540 IPR044974 GO:0006952
Adu02g01882 1835 Coils Coil 1802 1835 - -
Adu02g01882 1835 Coils Coil 1704 1731 - -
Adu02g01882 1835 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 710 977 IPR027417 -
Adu02g01882 1835 SUPERFAMILY L domain-like 1037 1361 - -
Adu02g01882 1835 Coils Coil 282 309 - -
Adu02g01882 1835 Gene3D Ribonuclease Inhibitor 1071 1403 IPR032675 -
Adu02g01882 1835 ProSiteProfiles TIR domain profile. 27 163 IPR000157 GO:0007165
Adu02g01882 1835 Pfam NB-ARC domain 192 449 IPR002182 GO:0043531
Adu02g01882 1835 Pfam NB-ARC domain 727 952 IPR002182 GO:0043531
Adu02g01882 1835 SUPERFAMILY "Winged helix" DNA-binding domain 953 1059 IPR036390 -
Adu02g01882 1835 CDD AAA 723 882 - -
Adu02g01882 1835 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 124 IPR035897 -
Adu02g01882 1835 SUPERFAMILY "Winged helix" DNA-binding domain 452 539 IPR036390 -
Adu02g01882 1835 SUPERFAMILY Toll/Interleukin receptor TIR domain 545 687 IPR035897 -
Adu02g01882 1835 Gene3D - 23 169 IPR035897 -
Adu02g01882 1835 SMART till_3 28 159 IPR000157 GO:0007165
Adu02g01882 1835 SMART till_3 545 685 IPR000157 GO:0007165
Adu02g01882 1835 Gene3D - 542 717 IPR035897 -
Adu02g01882 1835 Gene3D - 176 377 IPR027417 -
Adu02g01882 1835 MobiDBLite consensus disorder prediction 1504 1539 - -
Adu02g01882 1835 Coils Coil 1739 1773 - -
Adu02g01882 1835 SMART AAA_5 743 882 IPR003593 -
Adu02g01882 1835 SMART AAA_5 199 388 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01882 Adu-Chr2 79667284 79680638 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01882 29 541 WRKY Transcription Factor Family AT4G12020 24.812 4.42e-32 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01882 - - adu:107475200 3484.12