Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01881 ATGGATTTCAATGGGATGTTTGGAGCCGAAGTGGAACTGTCAGATGACAACAGCTCGGATGGATATTGTGGCCGTTATTATGCGAGTGACGATGAAGGTGAGGAGGACGAAGGTGGTCAGGACTGCGGTGGTGAGGAAGGTGACCCAACAGGTCGCAAAGAAGATGAACATGGTAACTTCTCAGGTGGTGCCAGTCATGCAGGGGATGGTGGGAAAAATCGGCCGGTTGTGGCAGAGGATTTCCTAGGCATGGAGTTTGTTGGCGAGCAGGATGCCTACCTTGCGTACAAGGAGCTCGCTAGAACTAGGGGCTTTGGGGTTCGCAAGGGAGATGTGGGGCGTGTTGATGGGGTTTTGGTCAGGAGAGACTTTTTCTGCCACCGCCAAGGCACAAGACATCATAAGCACTATGATCGTCCTGAGCGAGTTAGGGAGGAGAGATTGGAGAGTCGAATTGACTGCAAGGCGAAGTTGAAGATTTACTATGATGTGCAACGCAGTGTGTGGAAGGTCAGGACTATCTTCGATGAGCACAACCACGAGCTTGCTCCGGCCATGTTTTCCCACCTCTTGCCTAGTCATCGCAAGATGAGTAACGGTGACAAAGCGCAAGTTGATAGCATGAAGAAGTTTGGGATACCAACCTCGAAGATAATGGCTTATATGGCTGGTCAATCTGGAGGGTATGGAATGCTGCAATTTACAAAGCGTGATTTGTATAATTACGTACACGGGCAAAGGCTAGCCCGAATCAATGATGGCGATGCTGCAGCAACAATCAGTTACTTGGAGGGCAAGGCGAATGCCGACATGACGACTGTCGCCCGTTACACGCGAACTGCGGATAATCggctagggagcattctctgggtcgacgccatcgcggaggtgttcccggcagctaggcaccggctgtgcgggtggcacttggagaaaaatTGTGTTCAGAGGGTTAAGGATACTGAATTCCGGAAGGTCTTTAAGAAGGCTATGTATGTCAACTTCGAGGAATATTGGAAGAAGGCGGTGGAGTCACTTGGGCTTCAAAATAATAGTTGGGTTCAAAGCACGTACGAGCTCAAAGAGAGTTGGGCAACAGCATATCTCCGGGGCACGTTCTGTGCGGGATACAGGACAACCTCCAGGTGTGAGGGAATTAATGCATACATAAAGGGGTTCCTGAAATCCACTGATAGCATTTTGGAGCTGGTGCACAGCTTAGATCGCGTTGTAAAGGATTATCGAAATAATGAAGTCACGGCACAGTTCTATTCTACGTATTATAGCCCCGTGTTAACAACCGGGCTTGACTCCATTGAGCTTTTTGCATCAAAACTGTACACGCGGGCAGTTTTTAGAGAGGTGAAGAAACAAATCAAGGGTGTTGCGACCTTGCTGTTTCGTGGGAGAGATAGCATCAGCACAACGGTTGTCTACAAGTTTTCAAGGATGGGCGCCCCTGGTACGATTCACAAGGTTTTGTTCGACCCCGATGACAAGAAAATTCAGTGCGACTGTTCGATGTGGAATAGCGAGGGTATTCCATGTAGTCACATTTTCTGCGTGATGAAATACGAGGGTTTGGAACAAATACCGGACAGTCTTATATTGAGAAGATGGTGCAAGGATGCAAAAGATTCTAGCCGGATGCCGGTGATTACGAGACCTGGACACGAGGGTCGCATGCTTAGGTATGCCGCACTTTGTTCGGCTACAAGCTTGGTCGCCAGACTTGGTTCGGAAGAGGTGGAAGACTTTGAATTCGCCAGGGAAAGCATCGCGAGTGTATTAGAAAAGCTACGTCACCGAATTTATGAGAGGGCAGGTGGTCAGCCCGGTATGTCGGCATGGAGCCCAATGAAGGATCCGGTTGTTGCAAGAACAAAAGGTGCCCCTAAGAGGAAGAAGGATTTTGACCCAGGCAGTCAACCAGATGTCCGAGAGAAGAGACGTTGCTGCACCAAATGTGGCATCCCAGGGCATACAAAGAGGACATGCAGCGGGGACTGTGCACGAGGTGTGTCCGGGGTAGGTAACGGGGTCTCGCCAACAGTTGGAAAAGGTTCGCTTCACGGCCCTTCAGCATCTTCAGTGTCGCAACCGACCGAGCGCGGTTATGCGTTTGAGGATCAAACCTCGACTCAAGGCGAAGGTGGTCTCAATAACGTGTCTAGCGCAGCGATGAATACATCCTCCATGGTGAATCGGAGCGGTAGTCCATCTTGGCGTCCTCCATTCTGTGGCGGGGGAAGTGGGGGGACCTTCTTCCTTGGGGGCCAACACATCCACCAATTCTATGCATCCCAACCTTGCTCTGGGCACCAAAGCGAACCACCGCCGCACGAAGGCCACTGCAATACGTCGACTCCGACAAGGGCAACGAATGAAGACTTGTTTGAACGGTGGCTGCTCCAGGTACGCGGGTTCTCGTGA 2433 0.4875 MDFNGMFGAEVELSDDNSSDGYCGRYYASDDEGEEDEGGQDCGGEEGDPTGRKEDEHGNFSGGASHAGDGGKNRPVVAEDFLGMEFVGEQDAYLAYKELARTRGFGVRKGDVGRVDGVLVRRDFFCHRQGTRHHKHYDRPERVREERLESRIDCKAKLKIYYDVQRSVWKVRTIFDEHNHELAPAMFSHLLPSHRKMSNGDKAQVDSMKKFGIPTSKIMAYMAGQSGGYGMLQFTKRDLYNYVHGQRLARINDGDAAATISYLEGKANADMTTVARYTRTADNRLGSILWVDAIAEVFPAARHRLCGWHLEKNCVQRVKDTEFRKVFKKAMYVNFEEYWKKAVESLGLQNNSWVQSTYELKESWATAYLRGTFCAGYRTTSRCEGINAYIKGFLKSTDSILELVHSLDRVVKDYRNNEVTAQFYSTYYSPVLTTGLDSIELFASKLYTRAVFREVKKQIKGVATLLFRGRDSISTTVVYKFSRMGAPGTIHKVLFDPDDKKIQCDCSMWNSEGIPCSHIFCVMKYEGLEQIPDSLILRRWCKDAKDSSRMPVITRPGHEGRMLRYAALCSATSLVARLGSEEVEDFEFARESIASVLEKLRHRIYERAGGQPGMSAWSPMKDPVVARTKGAPKRKKDFDPGSQPDVREKRRCCTKCGIPGHTKRTCSGDCARGVSGVGNGVSPTVGKGSLHGPSASSVSQPTERGYAFEDQTSTQGEGGLNNVSSAAMNTSSMVNRSGSPSWRPPFCGGGSGGTFFLGGQHIHQFYASQPCSGHQSEPPPHEGHCNTSTPTRATNEDLFERWLLQVRGFS 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01881 810 MobiDBLite consensus disorder prediction 1 72 - -
Adu02g01881 810 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 293 603 IPR031052 GO:0006355
Adu02g01881 810 MobiDBLite consensus disorder prediction 689 704 - -
Adu02g01881 810 SMART 26again6 502 529 IPR006564 GO:0008270
Adu02g01881 810 MobiDBLite consensus disorder prediction 682 704 - -
Adu02g01881 810 ProSiteProfiles Zinc finger SWIM-type profile. 491 527 IPR007527 GO:0008270
Adu02g01881 810 MobiDBLite consensus disorder prediction 627 647 - -
Adu02g01881 810 MobiDBLite consensus disorder prediction 769 792 - -
Adu02g01881 810 ProSiteProfiles Zinc finger CCHC-type profile. 653 666 IPR001878 GO:0003676|GO:0008270
Adu02g01881 810 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 76 295 - -
Adu02g01881 810 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 293 603 - -
Adu02g01881 810 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 76 295 IPR031052 GO:0006355
Adu02g01881 810 Pfam FAR1 DNA-binding domain 96 183 IPR004330 -
Adu02g01881 810 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01881 Adu-Chr2 79650995 79654150 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu02g01881 FAR1 1.2e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01881 - - aip:110265240 947.962