Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01877 ATGCCTTCAAAATCCACAAGTAGttcatcatcagagcgaagatggatctacgatgtgttcttgagtttcagaggaaccgacactcgcactatcttcatttctcatctctacaactccctcacaaacgcaggaatctacgttttcaaggacaacgaggagcttcgcaaaggaggccaggtttcatcgttactcatgcaagcaatccaagtttctagaatctccatcattgttttctcgaagaactacgcgaactccaagagttgtctgaaagagctgcagagaatcatggattgtcgaagaagcataggccaagttgttgttcctgttttctacaacgtagaaccctctcatgtgcgtcatcagagaggtgcctttggaagaagctttcaggaTCTGAAGAAAACAATTTCAAAGAACAAAGCTCAACTTTGGGGTACTGCGCTTCGCGATGCTGCTAGTTTGACCGGATTTCATCTCAATAATTCCAGGAATGAAAGTGAAGATATCAATAAAATCATTGAAACCATCACTGAGTCGCTGGACAATACAGTCTTGTTTGTTGCACAACATCCAGTTGGAGTACAACCTCGTGCTCAACATGTGATTAAACTGTTAAACTACCAAAAATCAAAAGATGTTATGCTGTTGGGGATCTTGGGAATCGGAGGGATTGGGAAAACAACCATTGCCAAAGCCATTTACAATCAGATTCACCGCCATTTTGAGTCTTATTGCTTTCTTTCAAACATCAGAGAATTGTGGGAGCAGAGTACTACCAGTCAAGTGTATTTACAAGAAAGGCTTCTTTCCGATATTTACAAAACAACAAAGATCAAAATACATAACATTGAATCAGGCATATTCATTTTGCAACAAAGGCTTCGTTATAAACGAGCACTCCTCATACTCGACGATGTTGATAAGATAGAGCAACTAAAAGCCTTGTGTGGAAGCCGCGAATGGTTCGGTCCTGGAAGTAGAATAATCATCACAACAAGAGATGAACATTTACTCAAACTGCTTCAGGTTGATCACATATCTAGAATGCCGGAAATGGATCAAGATGAATCTATTCAACATTTCAGCTGGCATGCTTTCAAACAACCATGTCCTGGAGAAGATTTTGATCAACTTTCTAGAAATGTGGTTGCATATTGTGGAGGACTACCTTTAGCTCTTGAGGTTATTGGGTCATTTTTGTTTGATAAGAAAGTAAGAGAATGGGGAAGTGTGGTGGATAAGCTGAAAAGAATTCCCAATGATCAAGTACAGAGAAAGTTGAGAATAAGCTTTGATAGTTTGAATGATGATACAGAGAAAGAAATATTTCTTGACATTGCGTTTTTCTTTATTGGGATGGACCGAAATGATGTAATACATATTTTAGATGAATATGATGCTGCGATTGGAATCAGTGTTCTTGTAGATCGAAGCCTTGTCACCATTGACAATAATAACAAGCTTGGAATGCATGATTTGCTACGAGATATGGGGAGAGAAATTGTTCGCGAGAAATCACCAAAGGAGCCAGAGGAACGTAGCAGATTATGGTTGCAAAAAGATGTGTACCATGTATTGTCAAATCATATGGGGACAAAAGCTATCGAGGGATTGACTTTAAAGTTGACCAATTCGGTTAGTTTGGAGGCAAAAATGTTTAAGATGATGAAGAGACTTAGATTACTTCAACTTGCTGGTGTGCAACTAGATGGAAATTTTGAAGATCTTCCGAAACATCTAAGATGGCTTCAATGGCATGAATGCAATTTGAAGTACATACCTTCCAACTCTGATCAAGCAAGTTTAGTTGCCATTGAATTAGAATTCAGCAATCTCAAATTTGTGTGGAAAGAGGCCAAGGGCTTGATGACTACAACCAATGAGTTCAGTGACAAGTATTGGTTAACATTCGGTTCCAAAGGTTCTTCTGTGGTATTCGAAGTCCCTCAAATGAATGGGTGCAACTTGAAGGCAGTGACATTGCGTATTCTTTATTCTTCTTCCTCAGAAACCATCTTATCAGAATGCCTTAAAAACGTGTTAATCATAAATTACACAAAGTCCACCATTCAAGTCTATAAACAAGACACACTAGCCTCTCTTGAAGATGAGGAGGGAAAAACCATAACTTCACATATAGAACCCGGTAACAAAGTGGAGATTCTTCTTGTTGGTTACAAATTCATTGTGAAGAGAACAACAGTTTATCTGATATATGATGAACCGGTTGACCACTATGCGGAGCACTATCAAGCGGATGTTATTGTTTCAAGTGATAATTACATTATTTCTAGTGATAATAATGATATGGAAATTGATGAATGTTCTAGTGTTTCTGGTGGTAGTCATGATAGGTCAAAGAAGAAATATTCATGTTTCTATTGGTGTTGGAGATAA 2397 0.3183 MPSKSTSSSSSERRWIYDVFLSFRGTDTRTIFISHLYNSLTNAGIYVFKDNEELRKGGQVSSLLMQAIQVSRISIIVFSKNYANSKSCLKELQRIMDCRRSIGQVVVPVFYNVEPSHVRHQRGAFGRSFQDLKKTISKNKAQLWGTALRDAASLTGFHLNNSRNESEDINKIIETITESLDNTVLFVAQHPVGVQPRAQHVIKLLNYQKSKDVMLLGILGIGGIGKTTIAKAIYNQIHRHFESYCFLSNIRELWEQSTTSQVYLQERLLSDIYKTTKIKIHNIESGIFILQQRLRYKRALLILDDVDKIEQLKALCGSREWFGPGSRIIITTRDEHLLKLLQVDHISRMPEMDQDESIQHFSWHAFKQPCPGEDFDQLSRNVVAYCGGLPLALEVIGSFLFDKKVREWGSVVDKLKRIPNDQVQRKLRISFDSLNDDTEKEIFLDIAFFFIGMDRNDVIHILDEYDAAIGISVLVDRSLVTIDNNNKLGMHDLLRDMGREIVREKSPKEPEERSRLWLQKDVYHVLSNHMGTKAIEGLTLKLTNSVSLEAKMFKMMKRLRLLQLAGVQLDGNFEDLPKHLRWLQWHECNLKYIPSNSDQASLVAIELEFSNLKFVWKEAKGLMTTTNEFSDKYWLTFGSKGSSVVFEVPQMNGCNLKAVTLRILYSSSSETILSECLKNVLIINYTKSTIQVYKQDTLASLEDEEGKTITSHIEPGNKVEILLVGYKFIVKRTTVYLIYDEPVDHYAEHYQADVIVSSDNYIISSDNNDMEIDECSSVSGGSHDRSKKKYSCFYWCWR 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01877 798 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 156 IPR035897 -
Adu02g01877 798 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Adu02g01877 798 SUPERFAMILY "Winged helix" DNA-binding domain 422 526 IPR036390 -
Adu02g01877 798 PRINTS Disease resistance protein signature 386 400 - -
Adu02g01877 798 PRINTS Disease resistance protein signature 293 307 - -
Adu02g01877 798 PRINTS Disease resistance protein signature 215 230 - -
Adu02g01877 798 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 446 IPR027417 -
Adu02g01877 798 Gene3D - 188 346 IPR027417 -
Adu02g01877 798 CDD AAA 226 341 - -
Adu02g01877 798 Pfam NB-ARC domain 199 421 IPR002182 GO:0043531
Adu02g01877 798 Pfam TIR domain 17 182 IPR000157 GO:0007165
Adu02g01877 798 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 632 733 IPR044974 GO:0006952
Adu02g01877 798 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 614 IPR044974 GO:0006952
Adu02g01877 798 Gene3D - 10 187 IPR035897 -
Adu02g01877 798 SMART till_3 16 154 IPR000157 GO:0007165
Adu02g01877 798 Gene3D - 351 435 IPR042197 -
Adu02g01877 798 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 632 733 - -
Adu02g01877 798 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 26 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01877 Adu-Chr2 79554309 79560910 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01877 17 632 WRKY Transcription Factor Family AT4G12020 30.538 2.22e-68 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01877 - - adu:107475204 833.943