Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01875 atggagtatcgcagcagcagaggtcagcaagttgtgcctgtgttctatgaggtagatcccaaggaagtgtttaatcagagtggccatttcggagaagctttGTTGGCTACTCTGGCAAGAACTTCAACCAATCAAGCCAAGGTGGTGAGTTATATGACCGCGCTAAAAGAAGCTGCTGCCATTTCACCAAGGTTTCTCACCAATTTTCGGGATAGAAGCAAAACCATAGATAGTATCGTTGGACATGTTACCTCTTTGCTAGATTCAACAGCCTTATTCGTTGCAGAACATCCAGTAGGAGTAAACTCTCACGTGCAAGATTTGATTCAACTGTTAGATAATAAGAAATCAGATAGTGTTTTCATTATGGCAATATGGGGTATGGGAGGAATTGGTAAAACAACAGTTGCCAAAGTCCTCTACAATCAAATTAGTCACAATTTCGATGTGAGGAAGTTTGTCCCAGACATAGATGAAAGGATGGAGGATTTCCCAAGAAGGTGGCCTTTGGGCATTATAGAAGAGGAGCTTCTTTTGTTTCTCAAAGAACAAGTTGCAACAAAAGCTTGCAATTTCGACTCAACAAGTGTTATATGGTGGGAAGGAATTCGTTGTGTaaagAGTGCTTTCAAGAAAGCAACTCCTGAAAGGAATTATGCTGATCTGATTAATCGTGCACTTGAATATTCTGATGGATTGCCACTAGCTCTTGTGGCAGTTGGATCTGTATTATTTGAAAAAGTCAAAGAGCAGGATTGGAGGAAAGCACTCCGTGATGTAGGCTCCACTGCTGGATTTGTTGTTCAAAATTGGAGGAATGAAAGTGAGGATATTAAGAAGATTGTTGAACATGTTACTCATATGCTAGACATGAATGAATTGTTCATTGCTAATCATCCAGTAGGAGTAGAATCTCGTGTAAAAGAGCTGATTGAACTACTAAAAAGCCATCAATCAGAAGATCCTCTACTATTAGGCATATGGGGCATGGGAGGGATCGGTAAAACAACCATTGCCAAAGCAGTTTATAATAAAATTTTCCGTCAGTTTGATGGTCGATGTTTCCTCTTAAATATCAGGGAAGTTTGGGATCAAGATAATGGTGGCCTTCATTTGCAGCAGCAACTTCTTTCTTCTGTCTATAAGACAACAAAAATAAAGATACAGAACATAGAATCTGGAAAATCAATATTAGAGAAAAGGCTTGGAcagaaaaggatacttgttgtacttgatgatgtggataaattagagcaacttaatgctttggctgcaagctataaatggttctgtccaaggagtataataatcatcacaacaagagatgaaagacttcttagttggcttgaaattgacaaaagatataaaatggaagggttgaatgaggaagaatctattgaacttttcagttggcatgcattcaaagaaccacgtcctaggaaaaaatttgctacactttgtggtgaagttatttcctattgtgggaatttgccattagctcttgaggtcattgggtcacatttgtttgaaagaggaataaaagagtggaagagtgtcttgaacaaactcaaaagcattcccaataaagaagtgcaaaagaagcttaagataagctttgatggtttaagtgatgacaaagatagagaaatattccttgatatagcttttttctttattggaatggacaaaagtgatgtcactgatatactaaatggttgtggacattctgctgggattggaataagtattctTTTGGAGCGATGTCTTGTAACTGTTGACACTAAGAATAAACTTCGAATGCATGGTTTGCTGAGAGACATGGGAAGAGAAATCATTCGCGAGAGTTCTCCAACAACACCTGAAGAACGTAGTAGGTTATGGCATTCAGAGGATGTGCTTGATGTATTATCAAAAGACTTGGGAACAAAAGCTACCGAGGGAATTGCTTTGAAGTTATCAAGGATGAATCCAATTTGTTTGAAGACCAAAGCATTTAAGTACATGAGGAGACTCAGATTACTTCAACTTGCTGGGGTTCAACTTAAAGGAAACTTCAAACACCTTTCGACAGACCTTCGATGGCTATGCTGGCATGGATGCCCTTCAAGATATACAGAAGCAAACTTTGATCAAAGAAATTTAGTTGCCATTGACTTAAAATATAGCTACCTCCAACATGTATGGAAGAAGGGCCAGATGATGAAGAAACTGAAAATTCTCAATCTTAGTCATTCCGAACACTTGACACATACTCCAGACTTTTCATACTTGCCCAATCTTAAAAAGTTAATACTCAAAGATTGTCCAAGATTGTGTTCAATCTCCCACACCATTGGACATCTCAAACGAATTCTTCTAATCAACTTGAAAGATTGTACAAGCCTTCGAGTGCTTCCGAAAAGCATCTACAAATTAAAATCTCTCAAAACTCTCATTCTGTCTGGATGTACAAAGATTGACAAATTGGAAGAGGACTTAGAACAAATGAAATCTTTGACAACATTGATGGCAGATAACACTGCTATAACCAAAGTTCCCTATGCACTACCAAGATTAAACAACATTGTTTACATTTCTTTGTGTGGGTTCGAAGGATTGTGTCGTAATGTGTTTCCTTCAATCATCTGGTCATGGACCTCTCCAGCAAATAATCTCTCACCCCAAATGCATACAAATTTGGACCTGTCAAATCTTGTTTCCATAATGGTATCCAATAGCAGTAGTTCCCATGCAGGCCTATCATCCATCATTAAAGAGCTTCCAAAGGTTCAGAATCTTCAATTGGAATGTGGCTCACAACTAAACATATCAGGAAATGTAAATTTAGTTTCTTCTAATGTCACAAATTTTAAGGAACTGGAAGCACCATCAAGAACATCACATGTCTCAAATATGAATACCTCAGCATTAGGTAGTTGTTGCAGTGAAGGTTATATTTCTAGATCAGAGAACTCCTTGAATATCATTTTAATCCAAATGGGAATGAATTGCTTAATCACAAAAGCACTCATTCAGAGAATTTCACACAATTTAGCTGGAGATTTTTTGCTTCCTGGAAACAACAATCCTGATTGGTTAACCTTCAGCAGTGAAGGTTCTTCTGTGAGTTTTGAAGTTCCAAAAGTTAATGGCCGCAGCTTGAAGGCGATGATATTGTGCATTGTTTACTCTTCTTCCTCAAACATCATAGCATGTGAAGGGATAACTCTAAAGAATATGGTGATCATAAATTACACAAAAGCCACCACTCATATCTATGAGGGAGATACCTTGTCTTCACTTAAAGGTGAAGACTGGCAGAGTGTCTTATCAAATCTTGAAGCCAGTGACAAAGTGCAGGTTATTGCT 3348 0.3094 MEYRSSRGQQVVPVFYEVDPKEVFNQSGHFGEALLATLARTSTNQAKVVSYMTALKEAAAISPRFLTNFRDRSKTIDSIVGHVTSLLDSTALFVAEHPVGVNSHVQDLIQLLDNKKSDSVFIMAIWGMGGIGKTTVAKVLYNQISHNFDVRKFVPDIDERMEDFPRRWPLGIIEEELLLFLKEQVATKACNFDSTSVIWWEGIRCVKSAFKKATPERNYADLINRALEYSDGLPLALVAVGSVLFEKVKEQDWRKALRDVGSTAGFVVQNWRNESEDIKKIVEHVTHMLDMNELFIANHPVGVESRVKELIELLKSHQSEDPLLLGIWGMGGIGKTTIAKAVYNKIFRQFDGRCFLLNIREVWDQDNGGLHLQQQLLSSVYKTTKIKIQNIESGKSILEKRLGQKRILVVLDDVDKLEQLNALAASYKWFCPRSIIIITTRDERLLSWLEIDKRYKMEGLNEEESIELFSWHAFKEPRPRKKFATLCGEVISYCGNLPLALEVIGSHLFERGIKEWKSVLNKLKSIPNKEVQKKLKISFDGLSDDKDREIFLDIAFFFIGMDKSDVTDILNGCGHSAGIGISILLERCLVTVDTKNKLRMHGLLRDMGREIIRESSPTTPEERSRLWHSEDVLDVLSKDLGTKATEGIALKLSRMNPICLKTKAFKYMRRLRLLQLAGVQLKGNFKHLSTDLRWLCWHGCPSRYTEANFDQRNLVAIDLKYSYLQHVWKKGQMMKKLKILNLSHSEHLTHTPDFSYLPNLKKLILKDCPRLCSISHTIGHLKRILLINLKDCTSLRVLPKSIYKLKSLKTLILSGCTKIDKLEEDLEQMKSLTTLMADNTAITKVPYALPRLNNIVYISLCGFEGLCRNVFPSIIWSWTSPANNLSPQMHTNLDLSNLVSIMVSNSSSSHAGLSSIIKELPKVQNLQLECGSQLNISGNVNLVSSNVTNFKELEAPSRTSHVSNMNTSALGSCCSEGYISRSENSLNIILIQMGMNCLITKALIQRISHNLAGDFLLPGNNNPDWLTFSSEGSSVSFEVPKVNGRSLKAMILCIVYSSSSNIIACEGITLKNMVIINYTKATTHIYEGDTLSSLKGEDWQSVLSNLEASDKVQVIA 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01875 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 264 IPR027417 -
Adu02g01875 1116 Pfam TIR domain 5 84 IPR000157 GO:0007165
Adu02g01875 1116 Gene3D - 90 199 IPR027417 -
Adu02g01875 1116 Gene3D - 295 454 IPR027417 -
Adu02g01875 1116 SUPERFAMILY L domain-like 648 954 - -
Adu02g01875 1116 Pfam NB-ARC domain 304 534 IPR002182 GO:0043531
Adu02g01875 1116 Pfam NB-ARC domain 103 154 IPR002182 GO:0043531
Adu02g01875 1116 Gene3D Ribonuclease Inhibitor 619 1004 IPR032675 -
Adu02g01875 1116 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 249 1115 IPR044974 GO:0006952
Adu02g01875 1116 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 164 IPR044974 GO:0006952
Adu02g01875 1116 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 249 1115 - -
Adu02g01875 1116 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 5 164 - -
Adu02g01875 1116 Gene3D - 459 543 IPR042197 -
Adu02g01875 1116 Gene3D - 1 89 IPR035897 -
Adu02g01875 1116 Gene3D - 211 294 IPR035897 -
Adu02g01875 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 286 554 IPR027417 -
Adu02g01875 1116 CDD AAA 301 454 - -
Adu02g01875 1116 SUPERFAMILY "Winged helix" DNA-binding domain 530 636 IPR036390 -
Adu02g01875 1116 PRINTS Disease resistance protein signature 803 819 - -
Adu02g01875 1116 PRINTS Disease resistance protein signature 324 339 - -
Adu02g01875 1116 PRINTS Disease resistance protein signature 401 415 - -
Adu02g01875 1116 PRINTS Disease resistance protein signature 494 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01875 Adu-Chr2 79535246 79541533 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01875 301 800 WRKY Transcription Factor Family AT5G45050 32.638 5.19e-71 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01875 - - ahf:112727932 1662.12