Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01872 ATGTCTTCCCAAAACCAGGAACCCCAATTCATATATGATGCGTACATTAGTTCCGGATTGCAGTTCCCTCATCCTTTTATTTCAAGTCTCTATGATGCACTCAAAGGTGTTGGACTGATGTTGAGTTATGAGACCGCCCTTCGACAAGCTGCTTCCATTTTACCCAGGTTTCTTCCAGATATCTGGAATAACAGAGAAGTTATGAGCCATATAGTTGGACATGTTACATCCTTGATGGATTCAACGAAATTATTCATTGCAAAGCATCCGGTGGGAGTAGACTCTCGTGTGCAAGATTTGATTCAACTCTTAAACAATCAGAAAGCAGatggtgtccccataatagcaatatggggaatggcgggaatagAGATTGGCGTTAATCATATATATAGAGTGAAAGAAATGGACTACAACGAATGTGTTGAGCTTTTTAGTTGGAGCGCATTCAACAAAGCCACTCCTGAAAGAAGTTTTTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTGCCACTGGCTCTTGTGTGTGTTGGCTCTGCTGTATCTGAAAAAAGTATAGAAGAGTGGGAGAATGTATTGGACAGCTTCAAAAGATTCCCCTTTCAAGATGTATGGCAGGTTTTAAAAGAAAACATAGATTCTGTTGGATCTGAAGAAAAGAAAATATTCCTTGAACTAGCTTATTTGAGACATCTCTTTATTGGAATGAATCGAAATGATATAAGTCAGATATTACAAGAAGCTGGACGTAATGCCGCACCAAGAGCAATTAAAGGTCTTGAAGAGCATAGTCTTGTATGGTTTGATGAGGACAAGCTTTGCATGAATCGTTTGCTACAAGACATTGGAAGAGAAATGTATATGAAGGAATCCTCGATTGAGCCTCAGCAAAGGCCATATGATGTATTCTTGAGCTTTCGAGGCAAAGAAACTCGCTCAAAGTTCATCTCACATCTTTATGCATCTCTTGAAAATGCTGGTATCTATGTTTTCAAGGATGAAAACGGGCTAGCAAGAGGGGAAAGTCTCTCACTCTCGCTTCTGAAAGCAATTGGAGAGTCTAAAACTTCTATCATTATTTTGTCACCAAATTATGCATTTTCAAGATGGTGTTTGCAAGAGTTGGAAGACATCATGATATGTTGTAAAAACAAAACTCAAAAGGTGCTGCCAGTATTCTACCATACAGATCCCTCGGAAGTGCGAAATCAGACTGGTAAGTTTGGACAAGCTTTTGATAATCTTATGAGAAGATACCCGCATAAAATAAAAGGCAAGGAGCAGAGTTGGAGGAAAGCACTCCGTGAAGTTGGGTGCATTGCAGGGTTTGTCATCCGAAAATCCAAGAATGAAAGTGAGGATATTAAGAACATTGTTGAACAAGTTACTCATATGCTGGAAATGAAGGAATTGTTCGTTGCTAATCATCCCGTAGGAGTTGAATCTAGTGTTGAAGAGGTGATTCAACTATTAAAAGACCAGCAACAAGAAAATCCTCTACTACTTGGTATATGGGGCATGGGAGGGAGTGGTAAAACAACCATTGCCAAAGCGGTTTATAATAAAATTTTCCGTGAGTTTGAAGGTCGGTGTTTCCTCCTAAATATAAGAGAAGTTTGGGATCAAGATAATGGAATTCTTCATTTACATCAACAACTTCTTTCTGCTATCTACAAGACAACGAAAATAAAGATTGAAAACACTGAATCTGGAAAATCAATATTAGAGAGAAGACTTGGCcagaaaaggatacttcttgtacttgatgatgtggacaaattggagcaactaaattccttagctgcaagtcataaatggttctgtcctgggagcacaataatcatcacaacaagagatgaacatcttcttcgttgtcttagagttgataagttatatagtatgaaagagttaaatgacaaagaatccattgaactttttagctggcatgcattcaaagaaccgtatccaaaagaggagttcgattcacttgctaatgaagttatttcatattgtgagagattgccactggctcttgaggtaattgggtcacatctgtttaatagggaagtatatgaatggaggagtgttttgaataaactcaaaactattccaaacaatgatgtacagaagaagcttaaaataagttttgatggtctaagtgatgatagggacagagaaatatttcttgatgtagcatttttctttattggaatggacacaaatgatgtatctgatatattaaatggctgcgggcattcagctgacattggaataaatgttcttatGGAACGATGCCTTATTACTGTGGACACAAAGGGAAAACTTGGCATGCATGGTTTGCTGCGAGACATGGGAAGAGAAATTATTCGCGAGAGTTTGCCAATGAAACCTGAGGAACGTAGTAGGTTGTGGAATCCAGATGAAGTGCTTAATGTATTATCAAAAGAGATGGGAACAAAAGGTATTGAGGGACTTGCTTTGAACCTGCCAAAGTCATTGAATCCAACTCAGTTAAAGACAGAAGCATTTAAGGAGATGAAGAGACTGAGATTGCTTCAGTTTGCAAATGTGCAACTTGTTGGAGACTTTAAATACCTTTCAACAGATCTTCGATGGTTGTGCTGGCATGAATGTCCTCCAGAATATACAACTGCAAACTTTTATCAAGGAAATTTAGTTGCCATTGACTTCAAATATAGCAAACTCGACCTAGTATGGAAGAAGGGTCAGATGATGAAGAATCTAAAAATTCTCAATCTTAGTCATTCTCAACACTTGGCACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACTTGGGTTTCTCATACCATTGAACATCTCGAGCAAGTTCTTCTAATCAATTTGAAAGGGTGTTCAGGGCTTCGTGTACTTCCAAGAAGCATCTACAAGTTGAAATCTCTCAAAACTCTCATTCTTTCAGGATGTTCATCGATTGATAAGTTAGAAGAAGACATAGAACAAATGGAATCATTGACAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCTCATGCACTACTAAGATTAAAGAGTATTGTGTATATTTCTTTGTGCGACTTTAAAGGATTATCGCGCAATGTGTTTCCTTCAATCATTTGGTCATGGACCTCTCCAACAAATAACTTCTCACCCCAAGTGCAAACATTTTTGGACTTGTTAAATCTTGTTTCCTTAATAGTACCAAATAGCAACTCTCAAGGCCTATCATCCATCATCAGAGAGCTTCCAAAGGTCCAGAATGTTAGGCTGGAATGTGGCTCACAACTTCAAATTATAGGAGATGTAGTTTCTAATACTTTTGATGTCACAAACTGCAATGAAATGAAAGAAACATCAAGTGCATCAAATATCTCAAAAGGGAGTAGCTCATCATTAATTGGTTACTGCAGTGAAGGTGACATTATTGAATCAGAAAATTCCTTGAATTCAATTTTAATTCAAATGGGAATGAGTTGTTCAGTCACAGAGTTACTTAGGGAAAATATTTTGCAGAAATTTAATGCCAGAGTACCTGGAGAATGTTTGCTTCCAGGCAATAATAATCCTGATTGGTTAACATTCAGTGGAAAAGGTTCTTTTGTAAATTTCGATGTCCCTCATGTGAATGGATGCAAGTTAAAAACAATGATGTTGTGTGTCTCCTACTCTTCATCTCCAAGCATCAAAGCATCTGAAGGCCATATTATTAAAAATCTGTTTATCATAAATCTCACAAAGACCACTCATTATCTCTACGATGGAGATACATTGGCTTCACTTAGAGAAGAGGAATGGCATAAAGTGATTTCAAACCTTGAAGCTGGAGACAAAGTACAGATTGTTGTTGTTGCTAGGTTAGGAATCATAGTGAAGAAGATAGTAGTTTATCTCATATATGGTGAACCAATTGATATTGTTTGTGGTGATGATATGGTAGCAGATGGAAATGTCACTGTTCATGGTGGAGATGAAAAAAAAAATTTGAAGTCACTTGGAAAACGAAAACTCCAGAGAGCTAAGAAAGGGATAGCCGCTCCTCTGCCTCCTCGTCGCCTCAGCCTCCTCATCGCTGACTTGCTACCTCGTCGCCTTAGCCTCCTCATTGCTGCGTCGTCGCTTCACCTCAGCTTGATTTCTTTCCTCTCGCCGCCCCGTCACCGCGCTGCTCGCATCTTCCTCTGCGCCACCGCGCCACACGCGTCTTCCTCTGTGTTATCTTGCCGCACGCGTCCCGTTGTGCTTATGCTGTGCCGCCGGCCGTGGCTCGGTTGTCTGTCTCCCTCTTCTCTGTGTTATCAAGCTGCAATGGTTATCTTTTGCTGA 4374 0.3418 MSSQNQEPQFIYDAYISSGLQFPHPFISSLYDALKGVGLMLSYETALRQAASILPRFLPDIWNNREVMSHIVGHVTSLMDSTKLFIAKHPVGVDSRVQDLIQLLNNQKADGVPIIAIWGMAGIEIGVNHIYRVKEMDYNECVELFSWSAFNKATPERSFSGLINYAIEYSDGLPLALVCVGSAVSEKSIEEWENVLDSFKRFPFQDVWQVLKENIDSVGSEEKKIFLELAYLRHLFIGMNRNDISQILQEAGRNAAPRAIKGLEEHSLVWFDEDKLCMNRLLQDIGREMYMKESSIEPQQRPYDVFLSFRGKETRSKFISHLYASLENAGIYVFKDENGLARGESLSLSLLKAIGESKTSIIILSPNYAFSRWCLQELEDIMICCKNKTQKVLPVFYHTDPSEVRNQTGKFGQAFDNLMRRYPHKIKGKEQSWRKALREVGCIAGFVIRKSKNESEDIKNIVEQVTHMLEMKELFVANHPVGVESSVEEVIQLLKDQQQENPLLLGIWGMGGSGKTTIAKAVYNKIFREFEGRCFLLNIREVWDQDNGILHLHQQLLSAIYKTTKIKIENTESGKSILERRLGQKRILLVLDDVDKLEQLNSLAASHKWFCPGSTIIITTRDEHLLRCLRVDKLYSMKELNDKESIELFSWHAFKEPYPKEEFDSLANEVISYCERLPLALEVIGSHLFNREVYEWRSVLNKLKTIPNNDVQKKLKISFDGLSDDRDREIFLDVAFFFIGMDTNDVSDILNGCGHSADIGINVLMERCLITVDTKGKLGMHGLLRDMGREIIRESLPMKPEERSRLWNPDEVLNVLSKEMGTKGIEGLALNLPKSLNPTQLKTEAFKEMKRLRLLQFANVQLVGDFKYLSTDLRWLCWHECPPEYTTANFYQGNLVAIDFKYSKLDLVWKKGQMMKNLKILNLSHSQHLAQTPDFSNMPNLEKLILKYCPKLTWVSHTIEHLEQVLLINLKGCSGLRVLPRSIYKLKSLKTLILSGCSSIDKLEEDIEQMESLTTLMADKTAITQVPHALLRLKSIVYISLCDFKGLSRNVFPSIIWSWTSPTNNFSPQVQTFLDLLNLVSLIVPNSNSQGLSSIIRELPKVQNVRLECGSQLQIIGDVVSNTFDVTNCNEMKETSSASNISKGSSSSLIGYCSEGDIIESENSLNSILIQMGMSCSVTELLRENILQKFNARVPGECLLPGNNNPDWLTFSGKGSFVNFDVPHVNGCKLKTMMLCVSYSSSPSIKASEGHIIKNLFIINLTKTTHYLYDGDTLASLREEEWHKVISNLEAGDKVQIVVVARLGIIVKKIVVYLIYGEPIDIVCGDDMVADGNVTVHGGDEKKNLKSLGKRKLQRAKKGIAAPLPPRRLSLLIADLLPRRLSLLIAASSLHLSLISFLSPPRHRAARIFLCATAPHASSSVLSCRTRPVVLMLCRRPWLGCLSPSSLCYQAAMVIFC 1457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01872 1457 Gene3D - 639 723 IPR042197 -
Adu02g01872 1457 SMART AAA_5 501 636 IPR003593 -
Adu02g01872 1457 CDD AAA 481 623 - -
Adu02g01872 1457 Gene3D - 271 441 IPR035897 -
Adu02g01872 1457 Gene3D - 447 633 IPR027417 -
Adu02g01872 1457 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 312 1314 IPR044974 GO:0006952
Adu02g01872 1457 PRINTS Disease resistance protein signature 504 519 - -
Adu02g01872 1457 PRINTS Disease resistance protein signature 581 595 - -
Adu02g01872 1457 PRINTS Disease resistance protein signature 674 688 - -
Adu02g01872 1457 PRINTS Disease resistance protein signature 984 1000 - -
Adu02g01872 1457 Coils Coil 1000 1020 - -
Adu02g01872 1457 SUPERFAMILY L domain-like 780 1114 - -
Adu02g01872 1457 Pfam NB-ARC domain 131 218 IPR002182 GO:0043531
Adu02g01872 1457 Pfam NB-ARC domain 484 713 IPR002182 GO:0043531
Adu02g01872 1457 Pfam TIR domain 303 469 IPR000157 GO:0007165
Adu02g01872 1457 ProSiteProfiles TIR domain profile. 301 469 IPR000157 GO:0007165
Adu02g01872 1457 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 130 301 IPR044974 GO:0006952
Adu02g01872 1457 SMART till_3 302 443 IPR000157 GO:0007165
Adu02g01872 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 733 IPR027417 -
Adu02g01872 1457 Gene3D - 136 222 IPR042197 -
Adu02g01872 1457 Gene3D Ribonuclease Inhibitor 829 1045 IPR032675 -
Adu02g01872 1457 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 312 1314 - -
Adu02g01872 1457 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 130 301 - -
Adu02g01872 1457 SUPERFAMILY Toll/Interleukin receptor TIR domain 294 445 IPR035897 -
Adu02g01872 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 228 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01872 Adu-Chr2 79451558 79505265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01872 301 1033 WRKY Transcription Factor Family AT4G12020 29.801 1.19e-71 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01872 - - ahf:112727920 2126.67