Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01838 ATGTCTCAAGGTGGTAGGAACACGTGTCCCGTTGAGACATTCACTCCTGTTGCATGTGTTGCAGTGGAAGGCATTTGGTTTAGTAAAAAGTCCCACAATTCAATCATGGTGCCAGAAACGAGCTTCAGTGGTGATCGAATTCTTGAACCCGTCACCGATCAAAACTCCTACTCGGGGCTCGGCCTCCATCGTCCTTGTCTCCTCAGGCGCATTGTAGCCATCGTGTGTTTGTCGTTCTCGCTCGCGTCTGCATCCGGAGCCACCCCTCTTTGTCGCCTGCCAACGCTGGGACCTAAGCGAGAGCTACGCGTGGCCGTGAAACTGCCGTATTTTGTCGCCTGGGTGAGTTTCCCAACGCCTGCCACAAGACAATACACCCAGACTAGAGGAATACTCTGCTTCAAAGTCTGTAAAGTATTTCAATGCGAGGAGGATGCTAATTGTGGAGGGAGTGAAGGTGATGCTTACGAAATAGAAAATTCTGATTTGGAAGACCTTGCCGAACTGAGTGAGGAGGACCTCCTAAAGAAGGTATGGGACAGCATTGATAATGCATATGAGTTCTATCGGGGTTTCAGAAAACTGCATGGGTTTGGGGTGCGAAAGGGTGACTCCGGAAAAGACTGTGAGGGGAATCTTGTAAGGTATAGATTTTTTTGTAACAAGGAAGGGTTGAGGGAACGTAAACACTACGACAGGGTTGACAGAACGAGGGTACACAAACCGGAGACAAGAACTAACTGCAAGGCAATGTTATCGGTTTATTTAGACAAAAATGATAAGTATTGGAAGGTTAGGAAGTTAGTTACTGAACACAATCACGAGTTGACACCGGCAGGAATGGTGCACTTGATTGCCAATCATTGTCGGTTAACGGAAGTTGCAAAAAGTCAGATAGTTGGGATGCAAGCACATGGTATTGCAACGTCTAAGATTGTGGGGTACATGGCTGGTATGGCCGGGGGCTATTTGTTGTTGGAGTTCCTGAAGAAGGATGTCTATAACTATGCTGACAAAAGGCAGCGCATTAAAATAGCTGATGGCGATGCAAATTCTGCATTAGTGTATCTAGAGAGAAAAGCCGAATCAGACCCCATGGCAATCGCaaaatataatGCCGCCGATGAGTATGGCCTCTGCCACAAGCAGGTGCCGTGCCAGATGTATGATAAAAAAGAGACGTGGGTAAGTGCTTATCTGCGTGACAAGTTCTGCGCGGGCTACCGGACTACATCCCGCTGTGAAGGAATTAACGCATACGTAAACAAGTTTTCGAAGTCCACCCACACAATTTTGGAGCTGGTACAGTGCTTAGAGATGGTTGCCTTGTACACTAGAGAAGTGTTTGGTGATGTTAAGAAAGAGATTGAAGGGGTTGGTGCGCTGATCCTGATTAGCAAAAGGAGGATCATGAATACAATGATATACACCCTGAATGAGTACGAAGAACCTGATGTGACATAA 1464 0.4672 MSQGGRNTCPVETFTPVACVAVEGIWFSKKSHNSIMVPETSFSGDRILEPVTDQNSYSGLGLHRPCLLRRIVAIVCLSFSLASASGATPLCRLPTLGPKRELRVAVKLPYFVAWVSFPTPATRQYTQTRGILCFKVCKVFQCEEDANCGGSEGDAYEIENSDLEDLAELSEEDLLKKVWDSIDNAYEFYRGFRKLHGFGVRKGDSGKDCEGNLVRYRFFCNKEGLRERKHYDRVDRTRVHKPETRTNCKAMLSVYLDKNDKYWKVRKLVTEHNHELTPAGMVHLIANHCRLTEVAKSQIVGMQAHGIATSKIVGYMAGMAGGYLLLEFLKKDVYNYADKRQRIKIADGDANSALVYLERKAESDPMAIAKYNAADEYGLCHKQVPCQMYDKKETWVSAYLRDKFCAGYRTTSRCEGINAYVNKFSKSTHTILELVQCLEMVALYTREVFGDVKKEIEGVGALILISKRRIMNTMIYTLNEYEEPDVT 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01838 487 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 376 439 IPR031052 GO:0006355
Adu02g01838 487 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 178 328 IPR031052 GO:0006355
Adu02g01838 487 Pfam FAR1 DNA-binding domain 187 277 IPR004330 -
Adu02g01838 487 PANTHER OS06G0517100 PROTEIN 376 439 - -
Adu02g01838 487 PANTHER OS06G0517100 PROTEIN 178 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01838 Adu-Chr2 78726718 78730257 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu02g01838 FAR1 1.6e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01838 - - aip:107620053 404.06