Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01830 ATGGGAGCTCGTTGCTCCAAATTCTCTTTTTGCTGGTTCCACTCGAACCTCAAACCATGTGTCCTTGAATCCCCCGACCAAGAAAATGGTGTAAAGAGTGAAAAGGAGTTGTGTGAGTTCAAGTTGGAGGAACTGAAGGGTGCAACAAACGGTTTCAGTTCGGAGAACATAGTGTCTGAGCATGGAGAGAAGGCTCCCAATGTGGTCTACAAAGGGAAGCTTCAAAATGGAAGTTCCATCGCCATTAAACGCTTCAACAAGTTTGCTTGGCCCGATTCTCGCCAATTCCTTGAAGAAGCAAGGCAAGTGGGGAGCCTTAGAAGTGAACGTTTGGCGAATTTGATTGGTTATTGCTATGAAGGGGAAGAGAGGCTTCTAGTGGCTGAGTTCATGCCCCATGAAACACTTGCCAAACATCTCTTTCATTGGGAGAGAGAGCCAATGAAATGGGCAATGAGGTTGAGAGTGGCATTCTACTTAGCTCAAGGTCTAGAGTATTGCACAAGTAAAGGAAGGGGTTTGTATCACGATCTGAATGCCTATAGAATCTTGTTTGACCAGGATGGTAATCCTAGGTTGTCTTGCTTTGGCCTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGCACTAATTTGGCTTTCACCCCTCCTGAGTATCTAAGGACTGGGAGAGTGACCCCAGAGAGTGTGGTTTATAGTTTTGGAACATTGTTGCTTGATCTCTTGAGCGGTAAACATATTCCCCCAAGCCATGCACTTGACCTTATTCGGGGGAAGAATTTCTTGATGTTAATGGATTCAGCGTTGGAGGGTCATTTCTCAAAAGATGATGGAACAGAGTTGGTTCGTTTGGCTTCTCGTTGTTTGCAGTATGAACCTCGTGAGAGGCCAAATGCTAAGTCTCTTGTTGCTTCTCTCATCTCACTTCACAAACAATCAGAGGTTCCCTCATATGTTCTGATGGGTCTGAAGCATGAAACTACATTATCCTCAACAAAGCAATTGGCATTGACACCTTTTGGGGAAGCTTGTTTAAGAGTGGACCTTACTGCCATACATGAAATATTAGAGAAGATTGGTTACAAAGATGATGAAGGAATTTCCAATGAGCTTTCATTTCAATTATGGACCAGTCAAATGCAGGAGACCTTGAATTTGAAGAAGCATGGAGATACTGCTTTTCGAGCTAAGGACTTTGCCACTGCCATTAACTGCTATACTCAATTCATAGATGGAGGCACAATGGTATCACCAACAGTGTATGCAAGGAGGTGCTTATCATATTTGATGAAAGAGAAAGGGGAAGAAGCATTAGAAGATGCAATGCAAGCCCAAACAGTGTCTCCTCAATGGCTCACTGCTTTGTATCTTCAAGCAGCTTGTCTCTTCACCCTTGGCATGGATAATGATGCTCAACAAACTCTCAACCATGCCACTAATATGGAACCCAAAACAAACAAAATTTGA 1467 0.4349 MGARCSKFSFCWFHSNLKPCVLESPDQENGVKSEKELCEFKLEELKGATNGFSSENIVSEHGEKAPNVVYKGKLQNGSSIAIKRFNKFAWPDSRQFLEEARQVGSLRSERLANLIGYCYEGEERLLVAEFMPHETLAKHLFHWEREPMKWAMRLRVAFYLAQGLEYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEPRERPNAKSLVASLISLHKQSEVPSYVLMGLKHETTLSSTKQLALTPFGEACLRVDLTAIHEILEKIGYKDDEGISNELSFQLWTSQMQETLNLKKHGDTAFRAKDFATAINCYTQFIDGGTMVSPTVYARRCLSYLMKEKGEEALEDAMQAQTVSPQWLTALYLQAACLFTLGMDNDAQQTLNHATNMEPKTNKI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01830 488 Gene3D Transferase(Phosphotransferase) domain 1 132 323 - -
Adu02g01830 488 ProSiteProfiles Protein kinase domain profile. 55 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01830 488 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 487 IPR045845 GO:0004672|GO:0009742
Adu02g01830 488 SUPERFAMILY TPR-like 384 484 IPR011990 GO:0005515
Adu02g01830 488 SUPERFAMILY Protein kinase-like (PK-like) 36 314 IPR011009 -
Adu02g01830 488 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 487 - -
Adu02g01830 488 Gene3D Tetratricopeptide repeat domain 380 488 IPR011990 GO:0005515
Adu02g01830 488 Gene3D Phosphorylase Kinase; domain 1 26 130 - -
Adu02g01830 488 Pfam Protein tyrosine and serine/threonine kinase 68 306 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01830 Adu-Chr2 78473643 78480752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01830 26 306 Glycoside Hydrolase AT3G07070 33.657 9.53e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Adu02g01830 PK_Tyr_Ser-Thr 5.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01830 - - gmx:100814477 868.996