Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01792 ATGACTCCTAGTTTCCAAAGAATGATCTTCATGGCTCATGGTGGTAGACAGTTAGGGTTCTACACAAACAGGAAGGAGGAAGAGGCGTTTAGGGTTCATCATGTTATACTGCACACACGCACTCTCGAGCCTCCCTTCCCTCCATTCTCACCTCTCGCTCTTGCGGTCTCACCACGTCCAGTCTCCCCCGCGAGCTTTTGGCGCAACCTCCGTCCAGCCACCGCCGCTGTCGCAAGGTCCGTGGAAGTCACTCACCTGCACAGACCCGTGGTGCCAGCTTTCCGTTCGCACAACAAGCTTTCCCTTCAGCCGTCAAATCGCAGCCACCGCCAGCGCCAGTTGCAGTCGCGAGTGTCTTCCTGCCGGCGCCAGCTCTGTTCGACCCTTCCACCCCGGCCACTGTTCCTGTCGCCGCCAGCTCTGCATTCTTCTCTGTCTTCCACTAACCCTAGCATATACTCAGTGAGAACTCACTGCCGCTGTCTTTTCCTTCCACCTCCCTCTGCTTCTCCCCAACCCACACCGAATCCGTTTTCAAGTCCACTCTCGGTGCTGGTGTTTCGTTTTCGGCGCCGCTGCGCGGGTTCCAAAGCCAACGCCGAAGCGGTTTGTGAAGAACCAAATCCCCGATTCCATCCTCAACGACGCGGCCCTCAACGCCGCCATCTCCGTTCTCCCTCACAACTACAACTTCGAGGTCCACAAATGCGTTTGGCGCGTTCTTTCCACCGGCGCCAAACGCGTTGCCCTTCAGTTCCCGAGGGCCTCCTCATGTACTCCCTCCCTCTCTCCGACATCCTCACTGCCTTCGCTGCAGTCGACCGCTGCTACGTTCTCGGTGACGTCACCTACGGCGCTTGTTGTGTCGACGACTTCTCTGCCGCTGCGCTCTCTGCCGACCTCCTCATCCACTACGGCCACAACTGCCTTGTCCCCATCGATTCCACCACCATCCCCTGTCTCTACGTCTTCGTCGACATCAAAATCGACGTTTCCCATTTGGTTGATACCTTTAAATTGAACCTCGAATCTCGCTCCCAGAACCTCGTATTAGCTGGTACTATTCAGTTTGCATCTGCAATTAGGGCTGCGAAGCCGGAATTGGAGAAATCAGGGTTTAGGGTTTTGGTACCGCAGTCCAAGCCTCTTTCGGCCGGTGAGGTTCTTGGCTGCACTGCTCCCAAGGTTTCATTAATGGGTTCGTTTAGTGAGAATCCTGAGAATAGCGTTTTGGTATTTGTAGCTGATGGAAGGTTTCATCTTGAGGCGATCATGATAGCTAATCCTGGGATTAAGGCTTTTAGGTATGACCCTTACATTGGGAAGTTGTTTCTGGAAGAGTATGATCACGTGGGAATGAAGGAATCTAGGAAAGGTGCGATTTTGAGAGCGAGGGAGGAAGCTCGGAATTGGGGTGTTGTTTTGGGGACTTTGGGTAGGCAAGGGAACCCTAAGATTCTGGAGAGATTGGAAAAGAATATGAAGGAAAAAGGGTTCCTTTACACTGTTTTCTTGATGTCTGAGATTAGCCCTGCAAGGATTGCATTGTTTGAGGACTCCGTGGATGCTTGGATTCAGATTGCTTGTCCTCGGTTATCGATTGATTGGGGTGATGCTTTTGGGAAACCAGTGCTCAATCCCTTCGAGGCAGAGATCGCGTTGGGGGTGATACCTAGCTGGTGGGAGAAGAAGAAAAATGTGTTGGTGGCAAAGGTGCAAGAAGGTTGTGAAGATGGTGGTGTAAGTTGCCAGAAGAGTGGTGATTCTTCCTGTGAGTGTAGCTGTGGAGAAGATGAAAATGGAAATGAAAAGAGCGATTTTGGTGGTGAATATCCAATGGACTATTATTCTCAAGATGGTGGGGAGTGGAATTCCTCTTATGTGAAGAAGTCCTCTCGTCCTGTCGGAACACTAGGACGCGTTTTAGATCACCTCAAAAACACCAAGGGATTTTCTCGTAATAGATTAAAATATTTGGTCCTAGATGAGGCGGACAGGCTGTTGAATGAGGACTTTGAGGAATCACTTAATGAGATTATACGATTGATTCCTCGTGAGCGGAGAACATTTCTGTTTTCTGCTACAATGACTAAGAAGGTCCAAAAGCTCCAAAGAGTTTGTTTAAGGAATCCTGTGAAGATTGAAGCAGCCTCTAAGTATTCTACTGTTGACACACTGAAGCTTGGAGCCTTGAATTTATTCAAGTCTGGGGCTCTCAATATTCTCATTTGTACTGATGTAGCTAGTAGAGGATTGGATATTCCAACAGTAGATGTTGTGATTAACTATGACATCCCCACAAACTCCAAAGATTATATACATCATGTAGGAAGGACTGCTCGTGCAGGGCGTTCTGGGGTTGCAATTTCCCTTGTGAACCAATATGAGCTGGAGTGGTACATTCAAATAGAGAAACTTATAGTTTTTATCTTGGGATATTCTCTCCGTTTCATATTTTCCGAGGGAAACAAATTTGAGTTTACCCGAGTTCTAAGGGTTTCGAAAATGGAGGAGGAAGCCATGGGGAAGAAGAAACGGAGAGGTGAATCAGATTATGGCGAAGAAGATATTGACAAATACTTAGAGTTCTTTGGAGACAACCCTTTTGGATTTGGATCATCTGGACCTCATGGAAGGTCCAGGTTCCAAACTGAGGGAGGCGGATCATTCAGCGGATTCCATGCGCCGCTGAAGAAGCCGCCTCCTGTTGAGAGCAAGTTGGCATATAGTTTGGAAGAGTTGTACACGGGTTCCACAAGAAAAATGAAGATCTCAAGGATTGTTATGGATGCTAATGGGAGGCCAAACCCACTGAGATATTAA 2823 0.4878 MTPSFQRMIFMAHGGRQLGFYTNRKEEEAFRVHHVILHTRTLEPPFPPFSPLALAVSPRPVSPASFWRNLRPATAAVARSVEVTHLHRPVVPAFRSHNKLSLQPSNRSHRQRQLQSRVSSCRRQLCSTLPPRPLFLSPPALHSSLSSTNPSIYSVRTHCRCLFLPPPSASPQPTPNPFSSPLSVLVFRFRRRCAGSKANAEAVCEEPNPRFHPQRRGPQRRHLRSPSQLQLRGPQMRLARSFHRRQTRCPSVPEGLLMYSLPLSDILTAFAAVDRCYVLGDVTYGACCVDDFSAAALSADLLIHYGHNCLVPIDSTTIPCLYVFVDIKIDVSHLVDTFKLNLESRSQNLVLAGTIQFASAIRAAKPELEKSGFRVLVPQSKPLSAGEVLGCTAPKVSLMGSFSENPENSVLVFVADGRFHLEAIMIANPGIKAFRYDPYIGKLFLEEYDHVGMKESRKGAILRAREEARNWGVVLGTLGRQGNPKILERLEKNMKEKGFLYTVFLMSEISPARIALFEDSVDAWIQIACPRLSIDWGDAFGKPVLNPFEAEIALGVIPSWWEKKKNVLVAKVQEGCEDGGVSCQKSGDSSCECSCGEDENGNEKSDFGGEYPMDYYSQDGGEWNSSYVKKSSRPVGTLGRVLDHLKNTKGFSRNRLKYLVLDEADRLLNEDFEESLNEIIRLIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKLGALNLFKSGALNILICTDVASRGLDIPTVDVVINYDIPTNSKDYIHHVGRTARAGRSGVAISLVNQYELEWYIQIEKLIVFILGYSLRFIFSEGNKFEFTRVLRVSKMEEEAMGKKKRRGESDYGEEDIDKYLEFFGDNPFGFGSSGPHGRSRFQTEGGGSFSGFHAPLKKPPPVESKLAYSLEELYTGSTRKMKISRIVMDANGRPNPLRY 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01792 940 PANTHER 2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE SYNTHASE SUBUNIT 1 252 632 - -
Adu02g01792 940 Pfam Putative diphthamide synthesis protein 252 561 IPR016435 GO:0017183|GO:0090560
Adu02g01792 940 SFLD Radical SAM 3-amino-3-carboxypropyl Radical Forming 253 630 IPR016435 GO:0017183|GO:0090560
Adu02g01792 940 Gene3D Diphthamide synthesis DPH1/DPH2 domain 3 450 551 IPR042265 -
Adu02g01792 940 TIGRFAM diphth2_R: diphthamide biosynthesis enzyme Dph1/Dph2 domain 252 554 IPR016435 GO:0017183|GO:0090560
Adu02g01792 940 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 660 668 IPR000629 -
Adu02g01792 940 CDD SF2_C_DEAD 730 792 - -
Adu02g01792 940 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 252 632 IPR016435 GO:0017183|GO:0090560
Adu02g01792 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 804 IPR027417 -
Adu02g01792 940 SMART helicmild6 701 783 IPR001650 -
Adu02g01792 940 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 602 714 IPR014001 -
Adu02g01792 940 Gene3D Diphthamide synthesis DPH1/DPH2 domain 2 326 449 IPR042264 -
Adu02g01792 940 Gene3D - 894 935 - -
Adu02g01792 940 MobiDBLite consensus disorder prediction 204 230 - -
Adu02g01792 940 Gene3D Diphthamide synthesis DPH1/DPH2 domain 1 252 325 IPR042263 -
Adu02g01792 940 Gene3D - 726 802 IPR027417 -
Adu02g01792 940 SMART ultradead3 306 729 IPR014001 -
Adu02g01792 940 Pfam Helicase conserved C-terminal domain 679 783 IPR001650 -
Adu02g01792 940 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 675 831 IPR001650 -
Adu02g01792 940 Gene3D - 613 725 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01792 Adu-Chr2 77154545 77167259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01792 731 805 Eukaryotic Initiation Factors Gene Family AT3G19760 46.667 5.62e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01792 K07561 - gmx:100797181 566.229