Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01790 ATGGCTGAGGAGGGTTTTGAGGGTTACCATGTCCCACAACAAAGCAGAAGAGATAAGCTTAGAGTAGTTGTGGCTCACAACCAACAACACCACCATCAACAAACAACAACACTACTAGAATCTTCTTCCACTCCTCCTCCTACTACTACTACTACTTCTACTTCTTGGTACGACCCTTCTTCATTCATTCCCTCCGATTTATTAACCTGTGCAGCAGCAACACAACAAGGTCATCACGGTAATTTCCACCTCAACAACGAACCTTCTAAACCCAACAACACCACCAACTTATTCGCTTCTTCTTCTGCAGTGAAGCAGGAAGAACAACAACGTTCTGGTTTGATGATGATGGGCTTTGGTGTAGTAACCGCCATCAACAACGCTTCTTCTTCTTCATCTTCTTCTCCTTCTTCTAACTCCTCTTCCGTTTCCCTTTCCCATCACCATGCTTACATGGATCCACAATCTTCTTCTACTCTGCATTTGAATAACCCGTCAATTCACGTTTTTGGGAACAACAACAACAACAATAATCCGTTGTTTCTCTACCAGCCACAGAATCTCAGAGATTTCGATAACCATGGCGGTTACGGTGGTGGTGGTGGTGGCGGCAGCGGCGGAGGCGGTGAAATCATGGTGTTCAAGCCTGAACCATTATCTCTATCTCTCTCTTCCCACAACCATAACCATGGTAGTAACAATAACAATCATAACAGCAACAATAACGGCAATAATCTTCCTCTAGAACTGAATCTTCAGCGGTATGGGGCTATGATTTGCGGTGGTGGTGGTGGTGTGATTCCGGGGTTGGTGGTTAACAGTAGTGGTGGGGGTTCTGGTACTTCGAACGAAGTTTCTAGAAGCTGTTCGTCGGTAATGGTGGTACCACAAATGATGGGTCCATTTACGGGTTACGCTTCGGTGTTGAAGGGATCGAGGTTCTTGAAACCAGCACAACAATTGTTAGAGGAGTTATGTGATGTTGGTGTTGGTGTTGTTGGTGCTGAAGATAAGATCATTGTTGCTGATGCTTCGTTAATGGAACCTCCTCCTACTGCTGCTAGTACTACTACGCCATTAATGGAGTGCTTGAATCATTCTCATCATGAAGATCCTTTATTGCTTGCAGATCAGCATGCTGCTGCTGCTGTTGAGAGTCGCAAGAAGTCAAGGCTCTTAACCATGCTTGATGAGGTTTATAGGAGGTACAGGCAATATTATCAGCAGATGCATGCAGTGGTAACATCGTTCGAGTATGTTTCGGGCCTCACGAATGCAGCTCCATATGCGAGTTTGGCCATAAAGACAATGTCCAAACACTTTAGATGTCTTAAGAATGCAATTACTGACCAGCTTCAGTTCAACAATAAGACTCATTTTCAACTAAGCAACAGGAAAGACGAGTCTCCAAGATTCGGCAACAATGATCGTGGCCCTTACGGCCAAAGGTCAGGGTTCATTGAGCACCAACCTGTTTGGAGACCTCAAAGAGGACTCCCTGAGCGCGCCGTGACGGTTCTCAGGGCATGGCTATTCGAGCACTTTCTGCACCCTTACCCGACCGATACGGACAAGTTAATGTTGGCTAAACAAACTGGTTTATCTCGTAGCCAGGTGTCTAACTGGTTTATTAATGCAAGAGTAAGGCTGTGGAAACCAATGGTGGAAGAAATACACATGCTAGAAACCCGGCAAGCTCAGAAAAATACTCAAAGAGAAGAGCATAGTAGGAACAAGTCGAGCGATCCCTTGCCTTCAGATAACACAACTCTTGTTTCAGATAATCCATCGACCTCGGCCGCGGATAAATTTCAGGAGGCACCTTACAAGCGAGCTATGAACGAGCTTCCGAGCATGGCGATTAGGACTCAAGAACAAGTGAATCTTGCATGCCACGGCAACCAGCAAGTTGGCATTGGAGTGAGCATGGGGAGTGCTAGCAATAATGTGTCGCTTACACTAGGCCTTCACCAAAATCATGGGATTGGTTTGGCCGAACCGTTTCCATTGAGCGCGGCTCAGCGCTTCGGCCTTGGTCTCGAAACCAATAATGAAGGCTATGTCCTAAGCGGTTTTGAATCGCAAAACCGGCATTTTGGAAGGGATGTTATTGGAGGGCAACTATTGCATGACTTTGTAGGATGA 2145 0.4597 MAEEGFEGYHVPQQSRRDKLRVVVAHNQQHHHQQTTTLLESSSTPPPTTTTTSTSWYDPSSFIPSDLLTCAAATQQGHHGNFHLNNEPSKPNNTTNLFASSSAVKQEEQQRSGLMMMGFGVVTAINNASSSSSSSPSSNSSSVSLSHHHAYMDPQSSSTLHLNNPSIHVFGNNNNNNNPLFLYQPQNLRDFDNHGGYGGGGGGGSGGGGEIMVFKPEPLSLSLSSHNHNHGSNNNNHNSNNNGNNLPLELNLQRYGAMICGGGGGVIPGLVVNSSGGGSGTSNEVSRSCSSVMVVPQMMGPFTGYASVLKGSRFLKPAQQLLEELCDVGVGVVGAEDKIIVADASLMEPPPTAASTTTPLMECLNHSHHEDPLLLADQHAAAAVESRKKSRLLTMLDEVYRRYRQYYQQMHAVVTSFEYVSGLTNAAPYASLAIKTMSKHFRCLKNAITDQLQFNNKTHFQLSNRKDESPRFGNNDRGPYGQRSGFIEHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAQKNTQREEHSRNKSSDPLPSDNTTLVSDNPSTSAADKFQEAPYKRAMNELPSMAIRTQEQVNLACHGNQQVGIGVSMGSASNNVSLTLGLHQNHGIGLAEPFPLSAAQRFGLGLETNNEGYVLSGFESQNRHFGRDVIGGQLLHDFVG 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01790 714 SUPERFAMILY Homeodomain-like 495 560 IPR009057 -
Adu02g01790 714 MobiDBLite consensus disorder prediction 27 57 - -
Adu02g01790 714 MobiDBLite consensus disorder prediction 582 602 - -
Adu02g01790 714 MobiDBLite consensus disorder prediction 79 109 - -
Adu02g01790 714 MobiDBLite consensus disorder prediction 463 487 - -
Adu02g01790 714 MobiDBLite consensus disorder prediction 128 147 - -
Adu02g01790 714 Pfam Associated with HOX 308 449 IPR006563 -
Adu02g01790 714 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 46 688 - -
Adu02g01790 714 MobiDBLite consensus disorder prediction 25 57 - -
Adu02g01790 714 CDD homeodomain 493 554 IPR001356 GO:0003677
Adu02g01790 714 Pfam Homeobox KN domain 510 549 IPR008422 GO:0003677|GO:0006355
Adu02g01790 714 SMART prehox3 303 450 IPR006563 -
Adu02g01790 714 MobiDBLite consensus disorder prediction 564 609 - -
Adu02g01790 714 SMART HOX_1 493 557 IPR001356 GO:0003677
Adu02g01790 714 ProSiteProfiles 'Homeobox' domain profile. 490 553 IPR001356 GO:0003677
Adu02g01790 714 MobiDBLite consensus disorder prediction 79 111 - -
Adu02g01790 714 Gene3D - 496 558 - -
Adu02g01790 714 MobiDBLite consensus disorder prediction 221 245 - -
Adu02g01790 714 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 46 688 - -
Adu02g01790 714 MobiDBLite consensus disorder prediction 564 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01790 Adu-Chr2 77077842 77084053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01790 209 714 Homeobox Transcription Factor Family AT5G02030 46.617 1.43e-122 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Adu02g01790 POX 2.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01790 - - ahf:112727818 1226.08