LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu02g01788	ATGGCGATGGCTCAGGGAACGGGAATAGGGCGTAGCAGCAGCATGAACAGCAGCAGTAGCAGCAGGGTAATAGGGGAGTACATAGTGGGAAGAGAAATTGGTTCGGGTTCGTTCTCGCGTGTGTGGCATGGAAGGCACAAGGTTCATGGCACTGAGGTCGCCATCAAAGAGATCGCAACCCATCGTCTCAATAACAAGCTCCATGATAGCCTCATGTCCGAGATTTTCATCCTCAAGCGAATTAAGCACCCTAACATCATTCGTTTGCACGATATCATTCAGGCTCCTGGTAAGATACATCTTGTGTTAGAGTATTGTAAAGGGGGAGATCTATATTTTTACATTCAACGCCATGGAAGGGTACAGGAGGCAACCGCAAAGCATTTTATGCAGCAGCTGGCTGATGGCCTTCAAGTTCTCCGGGACAATAATGTAATTCATCGAGATCTAAAACCACAGAACCTCCTTCTGTCAAGAAATGATGAAAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCTAGGGGCCTTGCTGAAACCCTGTGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTACAGAAGTATGATGCCAAGGCAGATCTATGGAGTGTTGGTGCAATCTTATTTCAGCTTGTAATAGGAAGAACACCTTTTACCGGAAACAATCAAATACAGTTGCTACAGAACATTATGAAATCAACAGAATTGGTATTCCCATCTGATTGCCAAAGTCTCAGTTCTGACTGCAAAGATTTGTGTCAGAAATTGCTACGCCGAAATCCAGTGGAACGTCTTACTTTTGAAGAATTCTTTAACCATCCATTCCTTTCTAAGAAGCAACCAGAACGGATTGAACTGTTGAGGAATAGAAGTTCGTCAAGGCTGGTAGGTGGATTTAGTTCAGCAGAATCTGACCCTTTAAGAAAGACTGAGGAAAATTATCAAGAGGATTGCTTACCATTCTTTCTAGATGATGATTCTAGTGGTCCTGAGGGGAGTCCTTCCCTTTCAAAGAAGTCTTCAATCAAGTCTACCATTGGATTTGATCTAAGTACAAAACTAGATAAACCAGAGCCAGCATCTCCTGTTGCTAACAACATAAATTATACCTCCAGATACAGTAGTGTAACACAGAGACCTGAAAGCACGACTAAAAGATTGGACAACCCTAAAGTATCAGGAAGAAATCTCACTGGTCCTTTAGAACCTCTAGAACAAAGATTTACCGATTCTCATTCAAAAGTTACAGATTCCCTAGAGAATATTGATCAAGATTATGTTCTTGTGTCTGGACCCCCTATTGATGTGTCCTCATCTTCAGCGAGTGCTTCAAAGCCAAGCCATTCCCCATTTAAGTCAAGCAGTCTTCCTCAAGAGTCTTCAAAAACAATCACTAGATTAAGTGCTCCAATGCCAATTGTTGGAGTTTCTACCAGTAGCACATGCCAGATTGGAAGCTCAGAAAGTCAGGACTCTGCTCCTGGGACATCACATGGATCAATGGATACAGGTGATGAACAGCCGTCAGGTCATTGCATGACAAGGATTAAATCATTGCAACAGTGTGCATCTGCCATCACAGAATTAGTTAATGAAAAGATGGAGGCAGGAAAGCCGCTAGAAGCATTTTCTGTTCAGCTTGTAATTCTTGCCATTTGGAAGCAAGCACTGCATATATGCCATACACGAGCTGCCTCAGCTATGGAAGGTAGTCCAAATCAAGAAACTTTAAGATACAGGAGGAGTGCCAGCAAGAAGCATGGTAGTTCTGATTCAGAAGAATGCTTTGACGGAAACACCCAAGGGTCTAAGGATATGCTAGCTCAAATTGAAAGTGAGTTTCTGAAGGAATTTGAGCATGCTGAAGAACTTGCCAAAGCCATTGAACCTGGAAGCACAGAGATGCCAGATGCAATGGAGACAATTTTTCAATCTGCCCTTGCTTTTGGGAAACATGGGGGTGTGGAAGAGCTCATGGGAGACATGGAAAGTGCAGCTGCATTGTATTCGAAGGCAGTCCGTCTCTTACTCTTCCTACTAGTTGAAGCACCATCCTTGATTCTTAATCCTCCATTCTCTCCGACCAACTCGGACCGTTACAGGCTACGGAATTACATCGATATTCTCAATAACAGGCAAGGCTATTCGAGATCGCAGCGGATGACACTTCTGAAATGTGATGACAGTCAAGGCATCTTCAAAGAAAAGTTTTAG	2238	0.4334	MAMAQGTGIGRSSSMNSSSSSRVIGEYIVGREIGSGSFSRVWHGRHKVHGTEVAIKEIATHRLNNKLHDSLMSEIFILKRIKHPNIIRLHDIIQAPGKIHLVLEYCKGGDLYFYIQRHGRVQEATAKHFMQQLADGLQVLRDNNVIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVIGRTPFTGNNQIQLLQNIMKSTELVFPSDCQSLSSDCKDLCQKLLRRNPVERLTFEEFFNHPFLSKKQPERIELLRNRSSSRLVGGFSSAESDPLRKTEENYQEDCLPFFLDDDSSGPEGSPSLSKKSSIKSTIGFDLSTKLDKPEPASPVANNINYTSRYSSVTQRPESTTKRLDNPKVSGRNLTGPLEPLEQRFTDSHSKVTDSLENIDQDYVLVSGPPIDVSSSSASASKPSHSPFKSSSLPQESSKTITRLSAPMPIVGVSTSSTCQIGSSESQDSAPGTSHGSMDTGDEQPSGHCMTRIKSLQQCASAITELVNEKMEAGKPLEAFSVQLVILAIWKQALHICHTRAASAMEGSPNQETLRYRRSASKKHGSSDSEECFDGNTQGSKDMLAQIESEFLKEFEHAEELAKAIEPGSTEMPDAMETIFQSALAFGKHGGVEELMGDMESAAALYSKAVRLLLFLLVEAPSLILNPPFSPTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKCDDSQGIFKEKF	745

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu02g01788	745	CDD	STKc_ATG1_ULK_like	33	283	-	-
	Adu02g01788	745	ProSitePatterns	Protein kinases ATP-binding region signature.	33	56	IPR017441	GO:0005524
	Adu02g01788	745	ProSiteProfiles	Protein kinase domain profile.	27	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu02g01788	745	MobiDBLite	consensus disorder prediction	587	601	-	-
	Adu02g01788	745	PANTHER	SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED	17	719	IPR045269	GO:0004674\|GO:0006914
	Adu02g01788	745	MobiDBLite	consensus disorder prediction	486	519	-	-
	Adu02g01788	745	MobiDBLite	consensus disorder prediction	338	356	-	-
	Adu02g01788	745	MobiDBLite	consensus disorder prediction	486	512	-	-
	Adu02g01788	745	MobiDBLite	consensus disorder prediction	444	470	-	-
	Adu02g01788	745	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	145	157	IPR008271	GO:0004672\|GO:0006468
	Adu02g01788	745	Pfam	Protein kinase domain	28	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu02g01788	745	MobiDBLite	consensus disorder prediction	371	399	-	-
	Adu02g01788	745	SUPERFAMILY	Protein kinase-like (PK-like)	23	458	IPR011009	-
	Adu02g01788	745	Gene3D	Transferase(Phosphotransferase) domain 1	17	326	-	-
	Adu02g01788	745	PANTHER	SERINE/THREONINE-PROTEIN KINASE ATG1B	17	719	-	-
	Adu02g01788	745	SMART	serkin_6	27	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu02g01788	745	MobiDBLite	consensus disorder prediction	575	609	-	-
	Adu02g01788	745	MobiDBLite	consensus disorder prediction	328	423	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu02g01788	Adu-Chr2	76878880	76887749	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu02g01788	23	294	CBL-interacting serine-threonine protein kinases	AT2G30360	37.050	1.83e-56	197

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-3	Adu02g01788		Pkinase	6.6e-73	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu02g01788	K08269		-	gmx:100791596	1173.3