Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01770 ATGGATGGCCAAACTAAATCTTATACTTGTGTTTTTTGTAAGAGAGGATTCTCAAATGCACAAGCACTTGGAGGCCACATGAATATTCATAGAAGAGATAGAGCCAGGCTTAGGCAATCACTTGAAGAGAAAATGTTGCTTCAAATTGATGATGATCAACAAAAAAATAATAATACCAACCATAAGAAGCCATGGAATTTTCTAGAAATGGATGATGATGATGATGATTATGCAATAATCCAAAGGGGCAAAGGAACAATAATTGGTGGTACTTCAGAAATTCCTCATCAATTTCCTCTTCTTGTTGGGGTGCCACATAGTTATAATAATTATATGAATGAGATAAGGAAAGGTATTATTGAAGAAAAGAATATTGAAGTGGATCTTGAGCTTCGTCTAGGGTTTATTGAGCCAAAAGAAGCAACAACTTTGAGCACTAGGAAATTCTTTTAA 453 0.3444 MDGQTKSYTCVFCKRGFSNAQALGGHMNIHRRDRARLRQSLEEKMLLQIDDDQQKNNNTNHKKPWNFLEMDDDDDDYAIIQRGKGTIIGGTSEIPHQFPLLVGVPHSYNNYMNEIRKGIIEEKNIEVDLELRLGFIEPKEATTLSTRKFF 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01770 150 Gene3D Classic Zinc Finger 1 66 - -
Adu02g01770 150 SUPERFAMILY beta-beta-alpha zinc fingers 5 34 IPR036236 -
Adu02g01770 150 PANTHER TRANSCRIPTIONAL REGULATOR TAC1 5 144 - -
Adu02g01770 150 ProSiteProfiles Zinc finger C2H2 type domain profile. 8 35 IPR013087 -
Adu02g01770 150 ProSitePatterns Zinc finger C2H2 type domain signature. 10 30 IPR013087 -
Adu02g01770 150 PANTHER OS07G0101800 PROTEIN 5 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01770 Adu-Chr2 76276982 76277646 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01770 4 43 C2H2 Transcription Factor Family AT3G09290 80.000 1.83e-18 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu02g01770 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01770 - - adu:107475090 306.99