Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01745 ATGATGTTGAATCGCGGGTCAAATGTTTCGGCCGAAGGGGGTGGAGATGAGCTGTATTCGCAGCTATGGAAGGCATGTGCGGGACCACTGGTGGACGTTCCTCGTGTTGGAGAGAGGGTCTTCTACTTCCCTCAGGGGCACATGGAACAATTAGAGGCATCAACGAATCAGGAATTGAATCAGAGGATTCCGTTGTTCAAACTTCCCTCGAAGATCCTTTGTCGCGTCGTGAACATTCATTTGCTGGCTGAACAAGAAACTGATGAGGTTTATGCACAGATTACTTTGGTGCCGGAATCTAATCAAGCTGATGAGCCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCACCCATGGCGGCTTTTCTGTTCTCAGGAAACATGCCACAGAATGCCTTCCTGCTTTGGACATGTCCCAACCAACACCGACTCAGGAATTGGTTGCGAAGGATCTTCATGGTTATGAATGGCGCTTCAAGCATATATTTCGAGGTCAACCACGCAGACACTTGCTCACAACAGGGTGGAGTACTTTTGTGACTTCCAAAAGATTGGTTGCTGGAGACACCTTTGTATTCTTGAGAGGGCAGAATGGGGAATTGCGCGTAGGAGTGCGCCGTCTTGCTCGTCAGCAGAGTAACATGCCATCATCTGTAATTTCCAGTCAGAGCATGCACCTCGGTGTGCTTGCTACTGCCTCTCATGCTGTTGCTACTCAGACACTTTTCGTAGTTTATTACAAGCCACGCACGAGCCAGTTCATCATCAGCCTCAACAAGTATTTGGATGCTGTCAACAACAAATTTAGTGTTGGGATGAGGTTTAAGATGAGGTTCGAAGGGGATGATTCCACAGACACTGATAAAAGATTTTCGGGTACCATTGTTGGATTGGAAGATATATCTCCTCATTGGGAAAATTCTAAGTGGCGATCACTTAAGGTTCAATGGGATGAACCTGCAGCTGTTCCAAGACCTGATAGGGTTTCCCCATGGGAGATGGAACCCTACGTGGCTCCTGCTCTTACATCCTCAGTTCAACCTGCTGTTGTAAAGGCCAAAAGGCCTCGACCACCAAGTGAACATCCCGATCTCGATACCCAATCGGCTGCCTCAGTTTTCTGGGATTCAGGTCTAACACAGGCTGATATGACACAGCATAGTGTGATGGCCGAAAGTAAAAGGAGTGATACTACCAGCGTGTGGCATCATAAGCAGATCGATATGAATAGTAAAAGCAACAGCAATCTGATGTCAAGGAATCAGACAGAAGGAAGTTGGCTATCTTCCCCCCATTCTTCTTGTCCTTCGCAATTATTTCAGGACACAATGGATGACAGCAAGAGCGTCTCAGCTTGGCCTGCTCCAAATCCACACTCGTCTAGATTGAACAATGATCATGTGCATGATCAGGTTGACAAGGAAAACAAAGCTGAGACTGCTACGAGTTGTCGACTTTTTGGCATTGACCTTATTGATCATTCCCGGAACTCGTCTGCTGTAGAGAAGGCGGCTGCACAGGCGGTAAACATTCACAGTTTCACCTCTGAAGGCTGTGTGAGCAGAGTTTCCAAAACCGAGGCAGGTCAAAAGTTTGATGCCTCGAAGACTGGTAAGGAGAAGAAACAAGAGCAGCAGCAAGTATTGCCAAAAGAGACTCAGAGCAAGCAAATATGTAGCAGAAGTCGCACCAAGGTTCAAATGCAGGGTGTCGCAGTAGGTCGTGCCGTGGATCTGACTATGTTGGATGGCTATGAGCATCTTATTGTTGAATTGGAGGAGTTGTTCGACATAAAAGGGCAGCTTCAAGACAGGAATAAGTGGGAAATTGTCTTCACTGATGATGAGGGAGATATGATGCTGGTGGGAGACGATCCATGGCCTGAATTCTGCCACATGGTTAGGAGAATTTTTATCTGTTCCAGTCAAGATGTGAAGAAGATGAGCACAGGAAGCAAACTACCAATCTCTTCAATCGAAGAAGGCACTGTAATAAGTTCAGAAACTGCTGAAACATGA 2067 0.4509 MMLNRGSNVSAEGGGDELYSQLWKACAGPLVDVPRVGERVFYFPQGHMEQLEASTNQELNQRIPLFKLPSKILCRVVNIHLLAEQETDEVYAQITLVPESNQADEPXXXXXXXXXXXXXXXXXXXXXXXXXXSTHGGFSVLRKHATECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGQNGELRVGVRRLARQQSNMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIISLNKYLDAVNNKFSVGMRFKMRFEGDDSTDTDKRFSGTIVGLEDISPHWENSKWRSLKVQWDEPAAVPRPDRVSPWEMEPYVAPALTSSVQPAVVKAKRPRPPSEHPDLDTQSAASVFWDSGLTQADMTQHSVMAESKRSDTTSVWHHKQIDMNSKSNSNLMSRNQTEGSWLSSPHSSCPSQLFQDTMDDSKSVSAWPAPNPHSSRLNNDHVHDQVDKENKAETATSCRLFGIDLIDHSRNSSAVEKAAAQAVNIHSFTSEGCVSRVSKTEAGQKFDASKTGKEKKQEQQQVLPKETQSKQICSRSRTKVQMQGVAVGRAVDLTMLDGYEHLIVELEELFDIKGQLQDRNKWEIVFTDDEGDMMLVGDDPWPEFCHMVRRIFICSSQDVKKMSTGSKLPISSIEEGTVISSETAET 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01745 688 MobiDBLite consensus disorder prediction 463 482 - -
Adu02g01745 688 Pfam B3 DNA binding domain 133 223 IPR003340 GO:0003677
Adu02g01745 688 ProSiteProfiles B3 DNA-binding domain profile. 162 225 IPR003340 GO:0003677
Adu02g01745 688 MobiDBLite consensus disorder prediction 463 478 - -
Adu02g01745 688 Pfam AUX/IAA family 437 613 IPR033389 -
Adu02g01745 688 Pfam AUX/IAA family 618 661 IPR033389 -
Adu02g01745 688 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 677 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu02g01745 688 PANTHER AUXIN RESPONSE FACTOR 13 677 - -
Adu02g01745 688 CDD B3_DNA 133 223 IPR003340 GO:0003677
Adu02g01745 688 SMART B3_2 126 225 IPR003340 GO:0003677
Adu02g01745 688 ProSiteProfiles PB1 domain profile. 577 658 IPR000270 GO:0005515
Adu02g01745 688 MobiDBLite consensus disorder prediction 548 563 - -
Adu02g01745 688 MobiDBLite consensus disorder prediction 546 571 - -
Adu02g01745 688 Gene3D - 129 224 IPR015300 -
Adu02g01745 688 MobiDBLite consensus disorder prediction 427 458 - -
Adu02g01745 688 SUPERFAMILY CAD & PB1 domains 578 653 - -
Adu02g01745 688 Gene3D - 573 665 - -
Adu02g01745 688 Gene3D - 284 357 - -
Adu02g01745 688 SUPERFAMILY DNA-binding pseudobarrel domain 133 252 IPR015300 -
Adu02g01745 688 Pfam Auxin response factor 249 330 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01745 Adu-Chr2 75211918 75217300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01745 11 670 B3 DNA Binding Superfamily AT4G23980 55.988 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Adu02g01745 AUX_IAA 4.9e-11 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01745 K14486 - gmx:100779003 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01721 04 81462114 81466763 Adu02g01745 02 75211918 75217300 PCT