Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01724 ATGAGACCCATCTTAGTTCTTGGACCAAGTAGGGCATGCATGTCCTTGGTCCTATGTTGGGCCTATCTTAGGTTAAAAGAGTTTTCGAAACTGCTCCTTCTTTTTTTTTCTTCCTCTCTTTCTTTCCCTCAATCTCTTCCGAGCTCCACTTTGATTCCCGCCAATTCTCTGTTAGCAGAGAAGGATATGGATGAGTTGAAATCAGAGGAAGGTTGTATAGAGAATAAGCAATCAACAGCTGCTTCTAGCTCCTTTGTATCAGAAGGCAGTGGCAGTTCTATACCAAAGTCCCCGGGGATAGGTAGCCAGGCATCGGCTTCACCCCCTCATCGAAGAACCACTGGTCCTATAAGGCGAGCAAAGGGTGGTTGGACAGCAGAGGAGGTTACTGAGTTTTTCCCTGATAGATCAGAAGTTCAATGTCTGCACAGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAAGGACCTTGGACTAAGGAGGAGGATGACAAAATAGTTGAAATGGTGTCAAAATATGGGCCATCGAAATGGTCTTTGATAGCAAAGTCCTTGCCTGGTCGAATAGGAAAACAGTGTCGAGAACGGTGGCACAATCATCTTAATCCCGACATAAAGAAGGATGCTTGGTCTTCGGAAGAGGAGTTGGCCCTCATGAATGCTCATCGCATATATGGAAACAAATGGGCTGAAATTGCTAAGGTTCTTCCTGGAAGGACTGATAATGCTATAAAGAACCACTGGAATAGTTCGCTAAAAAAGAAGATGGATTTCTATTTAGCCACGGGAAGACTTCCACCAACTTTGAAGAACAGTCCACACGTTGTTGTTAAAGACACTGTTAGACATTCTAAACCTACATTATTTGTTTGTTCAAATAAAGAATCAGATACTGCAGTTGAATCTTCATCGGAAACTACAGAAATTACTCAACTAGATAGCAGTGACCAGAATGACAAGAATCGACTAGAGTGCTTGGTAGCAGTTGGAGATTCCTCTGGTGCTCCTCTTGTAAATGAATCTGTTGATACTGAATGCAAAGCTGGATCATCCAACATAAATATCAGCTGCAACAAATCAGAACTGGTGTCAAGCGGTACTTTCCAAGTACATAGTGCGAAGAACTCCGAGAATCCTGGACTGAGTGGCAAACCGAGTGAGAGTTGCAGAGACAATGCTAAGATGAGCAATAACAGATTCTGTAGAACATGTTTTTCACACGAAACTCCGGTCTCTGGTTCTTTATGCTACGAGCCACCACAGTTAGACATTTCAGTCCCTTTAGATTCTCTTTATTCCAATATCCTTCATGAGCAGAATGACTGCTCTTCTCCGATTGCGTCATCCGTTGGTTTCTTCTCTCCACTTGGTGTAAATGGTAGTGAAAACGTAACCCCTGAATCAATATTGAAAATGGCAGCAAAAACTTTTCCGAGTACTCCTTCAATAATGAGGAAGAGAAGGACTGTTTCCCAAGCACATGTCACTCCTAGTAAAGCTTTGAAAGCAGATATTGATTCACAGACGAGAAGGATGACAGTGGTATGCATAAAGTACAAGGAGGTGCTTTGTCATGATTCAAGGATTTTGGTTGGACTTGCTCTTGAGGCTGATTGA 1617 0.4249 MRPILVLGPSRACMSLVLCWAYLRLKEFSKLLLLFFSSSLSFPQSLPSSTLIPANSLLAEKDMDELKSEEGCIENKQSTAASSSFVSEGSGSSIPKSPGIGSQASASPPHRRTTGPIRRAKGGWTAEEVTEFFPDRSEVQCLHRWQKVLNPELVKGPWTKEEDDKIVEMVSKYGPSKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWSSEEELALMNAHRIYGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKMDFYLATGRLPPTLKNSPHVVVKDTVRHSKPTLFVCSNKESDTAVESSSETTEITQLDSSDQNDKNRLECLVAVGDSSGAPLVNESVDTECKAGSSNINISCNKSELVSSGTFQVHSAKNSENPGLSGKPSESCRDNAKMSNNRFCRTCFSHETPVSGSLCYEPPQLDISVPLDSLYSNILHEQNDCSSPIASSVGFFSPLGVNGSENVTPESILKMAAKTFPSTPSIMRKRRTVSQAHVTPSKALKADIDSQTRRMTVVCIKYKEVLCHDSRILVGLALEAD 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01724 538 Pfam Myb-like DNA-binding domain 158 216 - -
Adu02g01724 538 ProSiteProfiles Myb-like domain profile. 150 201 IPR001005 -
Adu02g01724 538 Gene3D - 154 206 - -
Adu02g01724 538 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 150 205 IPR017930 -
Adu02g01724 538 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 206 256 IPR017930 -
Adu02g01724 538 SUPERFAMILY Homeodomain-like 123 159 IPR009057 -
Adu02g01724 538 SMART sant 154 203 IPR001005 -
Adu02g01724 538 SMART sant 206 254 IPR001005 -
Adu02g01724 538 MobiDBLite consensus disorder prediction 77 121 - -
Adu02g01724 538 CDD SANT 157 201 IPR001005 -
Adu02g01724 538 SUPERFAMILY Homeodomain-like 152 248 IPR009057 -
Adu02g01724 538 ProSiteProfiles Myb-like domain profile. 202 252 IPR001005 -
Adu02g01724 538 CDD SANT 209 252 IPR001005 -
Adu02g01724 538 Gene3D - 208 272 - -
Adu02g01724 538 PANTHER MYB-RELATED PROTEIN B-LIKE 80 505 - -
Adu02g01724 538 MobiDBLite consensus disorder prediction 77 110 - -
Adu02g01724 538 PANTHER MYB PROTEIN-RELATED 80 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01724 Adu-Chr2 74130111 74137363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01724 32 488 MYB Transcription Factor Family AT3G09370 45.825 6.01e-121 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu02g01724 Myb_DNA-bind_6 6.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01724 K09422 - gmx:778081 552.747