Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01707 ATGGTTTTCACTTCAATTCCAGCAGCTTATCTTGAAGCAGCAGCCAACTGGCAGCAGCATCAACAGCAACAACAAAATCATCAACCTAGTGGCAACTCTGGTGGTTCTACATCTCCTCAGCTTCTTCCACCACCACCACCTCCGCCACCACAACCTCAACCTCATGGAGCAGGAGGAGGAGCCGGCTCCATCAGGCCAGGCTCGATGGCAGATAGGGCAAGGATGGCGAACCTTCCCATGCCGGAGGCTTCACTAAGGTGTCCAAGATGCGAATCAACCAACACAAAGTTTTGCTACTTCAACAATTATAGCCTCTCTCAGCCCCGCCATTTCTGCAAGACCTGTAGAAGGTATTGGACAAGAGGCGGGGCCTTGAGAAACGTCCCCGTCGGCGGAGGATGCAGAAGAAACAAAAGAAGCAAAGGAGGCGGTGGAGGATCTTCCAGATCCCCCGCCGCAAGCTCCGACCGCCAGACGGGGAGTGCCAGCTCAACAAACTCGGTTTCCTCAAACTCAACCGGTGACATAGTGGGCCTCGGCCCATCTATGCCACCATTAAGATTTATGGCTCCATTGCATCATCATCAACTCACAGATTTTGCAACCGCTTCTGGTACAGACATACCCCTAAACTATAACCTAATGAACTATACCTCAATTTCTGGATCAATGGGAGGCGTAGGTTTAGGTGACTTGAGTTTCCAAATAGGAAACCCTTTAGCCGCCGCCTCTGGCGGCAGCGGAGGAGGAGCAAGTGGTGGCTCTTCTCTCTTATCTGGATTAGAACAATGGAGGATTCCACAACAGTTTCCATTCATGGCTGGTTTGGAAGGTTCTTCACATGGTGGTGGTAACAATAATGGTGGTGGATTATTATACCCTTTTGAAGGAAGTGCTGAGATAAGTGGTTATGTGAGGCCAAAGGTTTCAACTTCTATGGTGTTAACACAATTGGCTTCAGTGAAAATGGAAGATTCTAGAGAACTTAATAATGTTTCTTCTGGACAGTTCTTGATGGGAAGCATTGGCAACAATAACAACAACACCACCAGCAACAACAATGTTCCAACACATGAACAATATTGGAATGGTGCTACTGGAACTTCTGCTTCAGCTTCTTGGACTGAACTTTCTGGTTTTAGTTCTTCTTCCACTACAAGCAATAACCAACTATAG 1176 0.4779 MVFTSIPAAYLEAAANWQQHQQQQQNHQPSGNSGGSTSPQLLPPPPPPPPQPQPHGAGGGAGSIRPGSMADRARMANLPMPEASLRCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGGGGGSSRSPAASSDRQTGSASSTNSVSSNSTGDIVGLGPSMPPLRFMAPLHHHQLTDFATASGTDIPLNYNLMNYTSISGSMGGVGLGDLSFQIGNPLAAASGGSGGGASGGSSLLSGLEQWRIPQQFPFMAGLEGSSHGGGNNNGGGLLYPFEGSAEISGYVRPKVSTSMVLTQLASVKMEDSRELNNVSSGQFLMGSIGNNNNNTTSNNNVPTHEQYWNGATGTSASASWTELSGFSSSSTTSNNQL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01707 391 Pfam Dof domain, zinc finger 84 139 IPR003851 GO:0003677|GO:0006355
Adu02g01707 391 ProSitePatterns Zinc finger Dof-type signature. 87 123 IPR003851 GO:0003677|GO:0006355
Adu02g01707 391 MobiDBLite consensus disorder prediction 343 364 - -
Adu02g01707 391 MobiDBLite consensus disorder prediction 16 38 - -
Adu02g01707 391 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 386 IPR045174 GO:0003700|GO:0006355
Adu02g01707 391 MobiDBLite consensus disorder prediction 143 176 - -
Adu02g01707 391 MobiDBLite consensus disorder prediction 39 55 - -
Adu02g01707 391 MobiDBLite consensus disorder prediction 126 176 - -
Adu02g01707 391 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 20 386 - -
Adu02g01707 391 ProSiteProfiles Zinc finger Dof-type profile. 85 139 IPR003851 GO:0003677|GO:0006355
Adu02g01707 391 MobiDBLite consensus disorder prediction 16 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01707 Adu-Chr2 73046090 73047794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01707 1 325 C2C2-Dof Transcription Factor Family AT2G37590 42.773 1.84e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Adu02g01707 zf-Dof 6.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01707 - - aip:107628427 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01553 04 66635020 66636709 Adu02g01707 02 73046090 73047794 PCT