Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01648 ATGATAAGGACAGCAGTAATGAATATCACGAGCTACTTCATTCTTCTCTCCGTGGCTGCTTCTTCCGCCGCTGCAGCTGCCGCCGTTGCGTCGCACAATCTCTCTCTATCATCCTTTGCATCGCACGAGATCCCTCCGCCGCCGCCGCTCTCGTCGCATCTACTCCCATCGTCGCAGATCTCTCTTTGTCACCGCTCTCATCGCATCTACTCCCTCTGGCTCCTCTTCCATCTAATCTCAACTCGCTCTCTTAGTTCTTCTCGTAACCATCTCAAATTTCAGGTTTTCTTAATTGTAACTTGGAAAGTCCCTGAAGAATATAGTACTAAATTTGATGGATCTTCTATTTTGAAGGAGACTGACATTGGGAGGCACGTGAATCAGTTGCGGAAGCATTCCTCCAATGGCGTTCGCAGATTGGTGAAGCTACTTGTGAGGAAGTGGAAGGAAATTGTGGATGAGTGGGTGAGGTTGAATCAATCGGGTGGAACAGCTTCTCTCATGGGTAAAACCAAACCTCAACTCAAATGTTTTGGGACATTTTTCTTAGTTAAGGAATTAGAAATCCAAGTGTTTGATGATAATTATTGGATCTTTTGTAAAGGTAGAGTTAATGTGGAGTTTGGTGACATTGATCTATCTGAGTTTCAAGAAGAGAACCAGGGTGATGATGGTGATAGAAATGATAATGATAGAGATGACGGGGCTGATATTAAAAGAGAAGCTGGTAGTCAAGAGGGAACCAGCAAGCTGCTGGAACAAATGAAAATGCAGCAGATGGATCTAACCCCCAGCCGAAGAAACTTGTTCCAATTTTTCTTGCTTTTGTACAGAAATATGATCCCTAGTAACTTTACAATGAGATTAAATGTGAATCAGCAACTTTCACCGGAGTTGGATCTCTTCATGAAACAGAGGCTCCAAAATTATGAGTTAAAAGGACGCGAAATTGGAACCTATGATGGAGAGTGTCCCTTCTACTGCTCTTACTCAGGCTATAATGATGAACTTATGTGGGCAGCAACATGGTTATACATGGCTACGAGGAAGCCTGCGTATTTGAAGTACATACAAGAAGAATCGATAAGTGCTAGCGTAACAGAATTTAATTGGGATCTTAAATATGCAGGAGCCCAAATCCTTCTTACCAAGTTGAAGATGGGTATTTGCAACCAGGATGCAGTCAAGCAATTGCAATCCATGATGGAAAATGAACATGCATCAGAAAATGAGATTGACAATGTTTTATCATCATATGTTGCTCTCAAGATCCAAAAAAGTGCAGCCCAGTTTGTTCAGGCAGCACTTCATGAGATTGATGTTCTTTCATACATTGCTAAGGGTGACCCTTCAAATTCGAAGTTTGTTGTTCAATTAATTGACCACTTTAAACACACTGGCCCGAATGGGCAGCACCTTTGCATGGTTATCGAGTTTCTTGGTGATAGCTTGCTACGTCTGATCAAATATAACCGATACAAATGCCTTCCATTGAATAAAGTTAGGGAAATGTGCAAATACATTTTGATTGGTTTGGATTACTTGCACAGAGAACTTGGTCTAATCCACACTGACCTCAAACCTGAAAATATTCTTCTACTTTCAACCATTGATGCTGCCAAAGACCCTTTTCAATCTGGACAATCCCCAATTCTGGAGAGGCCCGAGGGAAGCATCAACGGTGGATCACATGATAGATTGAATGGGCTGAATCAAGGAGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCTTTAAACTCTGCATTTAAATCATCATCCGGAACCAAAAGTTCTAGTCCTAAGACAACCGAAAGAAGTCATGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTTTCTCAAGTTCTTACTGCTGAGAAGAAGAAACAATCACCTTATTCTTCTCTTGCTGAGAAGAAGAAACAAgaggactatgatgatgatgaggatgaagatgacactgaagactatagctga 1974 0.4093 MIRTAVMNITSYFILLSVAASSAAAAAAVASHNLSLSSFASHEIPPPPPLSSHLLPSSQISLCHRSHRIYSLWLLFHLISTRSLSSSRNHLKFQVFLIVTWKVPEEYSTKFDGSSILKETDIGRHVNQLRKHSSNGVRRLVKLLVRKWKEIVDEWVRLNQSGGTASLMGKTKPQLKCFGTFFLVKELEIQVFDDNYWIFCKGRVNVEFGDIDLSEFQEENQGDDGDRNDNDRDDGADIKREAGSQEGTSKLLEQMKMQQMDLTPSRRNLFQFFLLLYRNMIPSNFTMRLNVNQQLSPELDLFMKQRLQNYELKGREIGTYDGECPFYCSYSGYNDELMWAATWLYMATRKPAYLKYIQEESISASVTEFNWDLKYAGAQILLTKLKMGICNQDAVKQLQSMMENEHASENEIDNVLSSYVALKIQKSAAQFVQAALHEIDVLSYIAKGDPSNSKFVVQLIDHFKHTGPNGQHLCMVIEFLGDSLLRLIKYNRYKCLPLNKVREMCKYILIGLDYLHRELGLIHTDLKPENILLLSTIDAAKDPFQSGQSPILERPEGSINGGSHDRLNGLNQGGPRQRAEALAALNSAFKSSSGTKSSSPKTTERSHGSQRAAAVAALSQVLTAEKKKQSPYSSLAEKKKQEDYDDDEDEDDTEDYS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01648 657 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 115 161 IPR035441 -
Adu02g01648 657 Gene3D Transferase(Phosphotransferase) domain 1 448 536 - -
Adu02g01648 657 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 415 564 - -
Adu02g01648 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Adu02g01648 657 SMART serkin_6 410 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01648 657 Pfam Protein kinase domain 420 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01648 657 CDD TFIIS_I 116 153 - -
Adu02g01648 657 Pfam Glycosyl hydrolase family 9 322 430 IPR001701 GO:0004553|GO:0005975
Adu02g01648 657 Pfam TFIIS helical bundle-like domain 116 152 IPR017923 -
Adu02g01648 657 MobiDBLite consensus disorder prediction 220 246 - -
Adu02g01648 657 MobiDBLite consensus disorder prediction 643 657 - -
Adu02g01648 657 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 415 564 - -
Adu02g01648 657 MobiDBLite consensus disorder prediction 545 577 - -
Adu02g01648 657 MobiDBLite consensus disorder prediction 589 609 - -
Adu02g01648 657 ProSiteProfiles TFIIS N-terminal domain profile. 1 155 IPR017923 -
Adu02g01648 657 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 113 164 IPR035441 -
Adu02g01648 657 SUPERFAMILY Protein kinase-like (PK-like) 417 534 IPR011009 -
Adu02g01648 657 MobiDBLite consensus disorder prediction 589 657 - -
Adu02g01648 657 ProSiteProfiles Protein kinase domain profile. 381 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01648 657 SUPERFAMILY Six-hairpin glycosidases 317 462 IPR008928 GO:0005975
Adu02g01648 657 Gene3D Phosphorylase Kinase; domain 1 415 479 - -
Adu02g01648 657 MobiDBLite consensus disorder prediction 217 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01648 Adu-Chr2 69786798 69796549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01648 413 552 EF-hand Containing Proteins AT5G22840 60.000 7.23e-51 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Adu02g01648 Glyco_hydro_9 5.7e-16 CL0059
TR IWS1 Adu02g01648 Glyco_hydro_9 5.7e-16 CL0059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01648 K08832 - egr:104419567 256.914