Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01624 ATGGAAAACTTCAGAGGCGCACATCGAGAAGTTATCCTCCGCCGTCGTTCATCTGCGCCACCTTCTTCTTCCGCGTTCATCCTCGATGGTGCCTTCCTCCTTCTCTGGTACTCATTCACAACGCCACATTCTCCTTCGTTAACACTCATCATCGTCGTCGCCTTCCTCCTCCTCATCGCCATTCCTCCTCCGCATCAATGTCGCCACGCCAAAAATTTACCTAAGCAGCACAGGAAGCACCGCGACGTTGTAGGAGGCGGCTTCAGAAAGTTTTGGCGCGTTCTACCTGTTGATAACGTTACACCGTTGCCCACCGCCTCAAGCATGAGTTCTCCAGGATCATCCTCAACCTCAAGAGTTTCAGTAGAAGAGCAAGCCCCATTGCCAAAGCCGGCTGATCCTGCAGCAAAATTATCAAGCGATGAGATTGCACCACTTTCAGGAAATCCATTCTTTCATGTAGTTCTTTCAAAATCACATGTTCGTCGTAGTTGTCTCATGGGGCCATCAAAGGACTTAGTAGATATACTTCCATTTGCTGAGGTCCCTACTGTTCTTAAGTGTGGAGGTGAGAGCTGGGACATGGTGTATCGTGGACATGCTCCGGGTCGCAAGTTCTTCGATGGAGGCTGGAGAAAATTTGTCAAAGCTAATTGTTTGGTAGAGGGAGATGCTTGTGTTTTCGAGCTCATGGCAAACAGTGATGAGAAAATTGTCTTTGAAGTTCAAATTCTCAGAGTCTGTTTATAG 750 0.48 MENFRGAHREVILRRRSSAPPSSSAFILDGAFLLLWYSFTTPHSPSLTLIIVVAFLLLIAIPPPHQCRHAKNLPKQHRKHRDVVGGGFRKFWRVLPVDNVTPLPTASSMSSPGSSSTSRVSVEEQAPLPKPADPAAKLSSDEIAPLSGNPFFHVVLSKSHVRRSCLMGPSKDLVDILPFAEVPTVLKCGGESWDMVYRGHAPGRKFFDGGWRKFVKANCLVEGDACVFELMANSDEKIVFEVQILRVCL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01624 249 ProSiteProfiles B3 DNA-binding domain profile. 151 248 IPR003340 GO:0003677
Adu02g01624 249 MobiDBLite consensus disorder prediction 103 123 - -
Adu02g01624 249 Gene3D - 135 248 IPR015300 -
Adu02g01624 249 SUPERFAMILY DNA-binding pseudobarrel domain 147 246 IPR015300 -
Adu02g01624 249 MobiDBLite consensus disorder prediction 103 136 - -
Adu02g01624 249 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 97 247 IPR044837 -
Adu02g01624 249 Pfam B3 DNA binding domain 152 241 IPR003340 GO:0003677
Adu02g01624 249 SMART B3_2 152 248 IPR003340 GO:0003677
Adu02g01624 249 CDD B3_DNA 150 246 IPR003340 GO:0003677
Adu02g01624 249 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 97 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01624 Adu-Chr2 68971494 68982969 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01624 101 247 REM Transcription Factor Family AT1G49480 33.544 3.25e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu02g01624 B3 4.8e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01624 - - adu:107474771 263.462