Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01620 ATGGGAGTTTGTCTGAGCGCCCAAGTTAAAGTTAAGAGAGAGGGAGAGATCTTTCACTGTTCTAATTTAAAGAGCTTTAGTTTATCAGAACTTAAGAAAGCCACAAGAAATTTCCATCCGAACAGTTTGTTAGGCGGTGGTTTTGGTTCTGTTTTTAAGGGTTGGATTGATGAGAATTCTTTGGTGCCTGCCAAACCTGGCACTGGCATTGGTATTGCGGTGAAGAGACTTAAACAAAGTGGCTTACCGGATCACACGGAGTGGTTGGCCGAAGTAGATTATTGTGGACAATTTTCTCATCCTCATCTAGCGAGGTTGATTGGATATTGCCTTGAAGATAAACACCGCCTTCTCGTCTTTGAGTTTATGCCTCGCGGACACTCACACTTTCAACCTCTATCATGGAGTCTCCGTTTAAAGGTTGCTCTTGATGTAGCCAAAGGGCTTGCATTCCTTCACAGTGCAGAAACAAATTTGATGTGTGTTCATTTTAACACTACCAGTGTCTTACTTGACTCGAATTACAATGCAAAACTTTCGGCCTTTGGGTTGCTAAAGCATCGACAGATAAGCAACATAGGTCATTGCATGCAGTTGGAGTTCAGCTCTGGTGGATATATAGCTCCCGAAATTTTATTAACTGGCTTTTATACTGCTAAGGGTACTGTCTACAATTTCGGAGTAGTCCTACTTGAAATGTTTACCGGCGAGAGGTTGATGGATAGGAATCGACCAACTGGGCAACAGAATCTGCTGGAGTGGGTTAGACCATACCTGGCTAACAAACGCAAGGTCTTAAAAGTTTTGGACACGCATCTCGAAGGGCAGTATTCAGTTGAGGAAGCCTATGAACTAGCCACACTCACCTTGCGATGCATATCAACATCACCCCGTTTCAGGCCAAAGATAGATGAAGTTGTTACATTACTGGAGCAGCTGCAGGCTCCTAATAATGCTGATTCAGGCAACCAAATTCCTTCTTCTAGCGAGTCTCGGCCCTCTGCCTCAATTCTATATACTTGA 1023 0.436 MGVCLSAQVKVKREGEIFHCSNLKSFSLSELKKATRNFHPNSLLGGGFGSVFKGWIDENSLVPAKPGTGIGIAVKRLKQSGLPDHTEWLAEVDYCGQFSHPHLARLIGYCLEDKHRLLVFEFMPRGHSHFQPLSWSLRLKVALDVAKGLAFLHSAETNLMCVHFNTTSVLLDSNYNAKLSAFGLLKHRQISNIGHCMQLEFSSGGYIAPEILLTGFYTAKGTVYNFGVVLLEMFTGERLMDRNRPTGQQNLLEWVRPYLANKRKVLKVLDTHLEGQYSVEEAYELATLTLRCISTSPRFRPKIDEVVTLLEQLQAPNNADSGNQIPSSSESRPSASILYT 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01620 340 PANTHER OS01G0588500 PROTEIN-RELATED 10 324 - -
Adu02g01620 340 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 10 324 - -
Adu02g01620 340 SUPERFAMILY Protein kinase-like (PK-like) 19 312 IPR011009 -
Adu02g01620 340 MobiDBLite consensus disorder prediction 317 340 - -
Adu02g01620 340 Pfam Protein tyrosine and serine/threonine kinase 44 309 IPR001245 GO:0004672|GO:0006468
Adu02g01620 340 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Adu02g01620 340 ProSiteProfiles Protein kinase domain profile. 37 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01620 340 Gene3D Transferase(Phosphotransferase) domain 1 122 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01620 Adu-Chr2 68833117 68834966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01620 15 314 Receptor kinase-like Gene Family AT4G02010 34.505 4.16e-59 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu02g01620 PK_Tyr_Ser-Thr 3.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01620 - - ahf:112727687 600.897