Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01601 ATGGCTGCGCTAGGTCCGGTTCACTCCCCCTCCCCTCAAAACCGTGTGTTTTCATTTAATAAAAAAGGCAACATTACAACAAAACGTGAACAACCCCCTTTTTCTCTTACAAACCTAACCAAATCCTCAATTCTAAAACGCGTTTCATCACCACCGCCTGGAACTCATCGTCTCTGTCTTCGTCGGGTAGAGGGTGGCATCGCCGCCGGGTGTGACAGAGGGTGCCGTGCCGTCTTCGTCTCTCGAAGGTCCATTAGACCCTCTTCTCCTCTACATCGCGCGAAGGTCTCGGAGCTCTTGGTGTCGCCATCGCAAACGGTTGCTCGGTCTCTACCGGAAACCTCGCCGAGAATCTTTGTTCGGGGCCTCGTCGTCGCAAAGTATACTCGTCGCCTGTCATCGTTTCTCTTCCCCTCGCCGTCGTCTATCTGTGTCGCGGTTGAGCTCGACGGTCTCAACGACCCTTCCTCCGGTCAGACAGTAGTTTCAGTTTCTGATTCAGACGCTGTTGGAATTATTGCATCCATGTCTAACATCAGCAACAATGTGGCTGGGGTTGACAACACCTTCAGAAGAAAATTCGATCGAGAAGAGTATTTGGAACGAGCTCGGGAGCGTGAGAGGCAGGAGGAGGAGGGTCGATCTAAATCTAAAGCTAAAGGTCCTCCAGTGCAGAGGAAACCCCTAAAACATAGAGATTATGAAGTGGACCTCGAGTCCCGCCTAGGCAAGACTCAAGTTGTTACGCCGGTTGCACCACTGAGTCAGCAGGCTGGATATTACTGCTCTGTTTGTGAGTGTGTGGTAAAGGACTCAGCGAACTACTTGGATCATATTAATGGAAAGAAACATCAAAGAGCTTTGGGCATGTCTATGCGAGTTGAACGAGCCTCTCTCCAACAGGTTCAGGAACGATTTGAGGTTCTTAAGAAACGTAAAGATCTTGGCACATTCACCGAGCAAGATCTTGACGAAAGGGTTCTAAAACAGCAGCTAGAAGAGGAAGAAAGAAAACGATTGCGTCGTGAAAAGAAGAAGGAAAAGAAAGAGAAGGCAATGGAAGAACCGGAAATTGATCCTGATGTTGCGGCCATGATGGGGTTTGGTGGTTTCCGGTCATCAAAGAAATGA 1131 0.4916 MAALGPVHSPSPQNRVFSFNKKGNITTKREQPPFSLTNLTKSSILKRVSSPPPGTHRLCLRRVEGGIAAGCDRGCRAVFVSRRSIRPSSPLHRAKVSELLVSPSQTVARSLPETSPRIFVRGLVVAKYTRRLSSFLFPSPSSICVAVELDGLNDPSSGQTVVSVSDSDAVGIIASMSNISNNVAGVDNTFRRKFDREEYLERARERERQEEEGRSKSKAKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLQQVQERFEVLKKRKDLGTFTEQDLDERVLKQQLEEEERKRLRREKKKEKKEKAMEEPEIDPDVAAMMGFGGFRSSKK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01601 376 MobiDBLite consensus disorder prediction 202 231 - -
Adu02g01601 376 MobiDBLite consensus disorder prediction 333 376 - -
Adu02g01601 376 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 182 376 IPR040107 GO:0000398|GO:0005681
Adu02g01601 376 Pfam Zinc-finger of C2H2 type 260 284 - -
Adu02g01601 376 Coils Coil 325 355 - -
Adu02g01601 376 MobiDBLite consensus disorder prediction 333 358 - -
Adu02g01601 376 SUPERFAMILY beta-beta-alpha zinc fingers 256 297 IPR036236 -
Adu02g01601 376 Gene3D Classic Zinc Finger 255 292 - -
Adu02g01601 376 SMART ZnF_U1_5 257 291 IPR003604 GO:0003676|GO:0008270
Adu02g01601 376 MobiDBLite consensus disorder prediction 202 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01601 Adu-Chr2 68085682 68092092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01601 180 322 C2H2 Transcription Factor Family AT3G05760 83.217 9.14e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu02g01601 zf-C2H2_jaz 4.2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01601 K12848 - gmx:100527057 310.842