Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01573 ATGGATTCGAATTCGCTTCAAGGCTATCAACTTGAACAACAACAAAGCAGTAGTTCTGGTTTGCTTCGTTATCGCTCTGCACCGAGTTCGCTTCTCGCGAATCTCACTCCAACTTTCACTGAATCCCAAACCTTGCTCTCGAGATTCGCCAATAGTAATAGCAGTAGCAGCAAGAACAATATTTCCAAAACCGATACCGTTTCGCATAGCTTCCAAGAATTCCCAGATACAAACACAAACACAAAACCAACCAATAAGGGTTGTGATTCGAAGGGTCTGAGGCGGATGAATTCTGGAGGGCACGGATATGGTGGTGGTGGATTGCCACCTCACTACCCAAGGAACACTTCTTCTTCTTCTTGTTCATCTTCAATGGATGGGTTTTTAGGGTTGGTTATGGGTTCAATGGGAATGGACCAAAAAGGGTTTGGCGTTTCTTCTTCTTTAAATCTTCTCAGGCAGAATAGTTCCCCTGCTGACCTTTTCTCCAACGTTTCATTTCAAAATGGATTTGCTACCATGAAAGGTGTCGGGAACTATGGTCATGTTAACAGCACCAGCGAAGAACTTAGTCCATCGATGAACAGATTGAAGAATCAGATTAGCTTCTCATCAAGAACTGCTTCTTCCTTGGGAATGTTGTCGCAGATCTCCGAAATAGGGAGCGAGGAAATTGGGGCAAATAGCCCTGACGATGGGAGGCAGGGTGGTAGCAATGGTGATGCCTTGCATTACAGCCCCGGATTCTCCTATGGTTCTTGGAATGATGCACCACAACAGTCTGAAAACCTCACTGGCTTGAAAAGAGGGCGAAGTAGCAATGGAAAGTTGTTTCCTGATGTTCAGAATGGAGAGCTAGGAAATCAAGTTCATATGCTATCACATCACTTGAGTTTGCCGAAAACTTCATCAGAGATGATTGGTATGGAGAATCTGCTTCAGTTCCCAGATTCTGTTCCTTGTAAAATCAGAGCGAAGCGAGGCTGCGCTACTCATCCCCGAAGCATAGCTGAAAGGGTACGAAGAACACGGATCAGTGAACGAATGAGGAAATTGCAAGAGCTGGTCCCAAACATGGACAAGCAAACCAACACAGCAGACATGTTGGACTTGGCGGTTGACTACATTAAAGATCTTCAGAAACAATTCAAGAATCTAAGTGAAAAGAGGGCAAACTGCAAATGTATAAGCATGCGGAGAGCAGATACAAATCAAATTGTTTAA 1224 0.4428 MDSNSLQGYQLEQQQSSSSGLLRYRSAPSSLLANLTPTFTESQTLLSRFANSNSSSSKNNISKTDTVSHSFQEFPDTNTNTKPTNKGCDSKGLRRMNSGGHGYGGGGLPPHYPRNTSSSSCSSSMDGFLGLVMGSMGMDQKGFGVSSSLNLLRQNSSPADLFSNVSFQNGFATMKGVGNYGHVNSTSEELSPSMNRLKNQISFSSRTASSLGMLSQISEIGSEEIGANSPDDGRQGGSNGDALHYSPGFSYGSWNDAPQQSENLTGLKRGRSSNGKLFPDVQNGELGNQVHMLSHHLSLPKTSSEMIGMENLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQFKNLSEKRANCKCISMRRADTNQIV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01573 407 MobiDBLite consensus disorder prediction 251 283 - -
Adu02g01573 407 MobiDBLite consensus disorder prediction 50 87 - -
Adu02g01573 407 MobiDBLite consensus disorder prediction 50 119 - -
Adu02g01573 407 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 332 393 IPR036638 GO:0046983
Adu02g01573 407 MobiDBLite consensus disorder prediction 252 270 - -
Adu02g01573 407 Gene3D - 330 400 IPR036638 GO:0046983
Adu02g01573 407 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 329 379 IPR011598 GO:0046983
Adu02g01573 407 SMART finulus 335 385 IPR011598 GO:0046983
Adu02g01573 407 Coils Coil 369 396 - -
Adu02g01573 407 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 13 399 - -
Adu02g01573 407 MobiDBLite consensus disorder prediction 223 242 - -
Adu02g01573 407 Pfam Helix-loop-helix DNA-binding domain 334 380 IPR011598 GO:0046983
Adu02g01573 407 MobiDBLite consensus disorder prediction 1 21 - -
Adu02g01573 407 PANTHER TRANSCRIPTION FACTOR BHLH130 13 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01573 Adu-Chr2 67106359 67109529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01573 1 384 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 47.959 1.46e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu02g01573 HLH 4.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01573 - - aip:107625483 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g01573 02 67106359 67109529 Adu02g01573 02 67106359 67109529 ECH
Adu02g01573 02 67106359 67109529 Adu09g03015 09 117770204 117779241 ECH
Adu06g00947 06 11739673 11743472 Adu02g01573 02 67106359 67109529 PCT