Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01570 ATGAGGATTATGATAAAGGGCGGTGTTTGGAAGAACACCGAAGATGAGATCCTGAAAGCAGCTGTTATGAAATATGGCAAGAACCAATGGGCTCGAATCTCTTCCCTTTTGGTTCGTAAATCCGCTAAGCAATGCAAGGCTCGCTGGTACGAATGGCTCGATCCTTCCATCAAGAAGACTGAGTGGACTAGAGAAGAGGATGAGAAGCTGCTTCATCTTGCTAAGCTTATGCCCACCCAGTGGAGAACGATTGCTCCTATTGTAGGACGTACTCCTTCTCAGTGTCTTGAGCGCTACGAGAAGCTCCTTGACGCAGCCTGTGTAAAGGATGAGAACTATGAACCTGGTGATGATCCTCGGAAGTTGCGTCCTGGGGAGATTGATCCAAATCCAGAGTCAAAACCTGCACGCCCAGATCCTGTTGATATGGACGAAGATGAAAAGGAGATGCTTTCCGAAGCACGAGCCCGGTTAGCCAACACAAAAGGAAAGAAGGCGAAAAGGAAAGCGAGGGAGAAACAGCTTGAGGAAGCCAGAAGACTTGCTTCTTTACAGAAGAAGAGAGAACTGAAGGCTGCGGGAATTGATGTCAGGCAGCGAAGGAGAAAAAGGAAAGGCATTGATTATAATGCAGAAATCCCTTTTGAGAAAAGGCCTCCTCCTGGTTTTTTTGACACTGCTGATGAAGACAGACCCGTGGAACAGCCCCATTTCCCAACTACAATAGAAGAACTTGAGGGTAAAAGAAGGATTGATGTTGAGACACAGTTAAGAAAGCAAGACATTGCAAAAAATAAAATTGCAGAGAGGCAAGATGCCCCATCTGCTATACTACACGCCAATAAGTTGAATGATCCGGAAACAGTAAGGAAACAAACCAAACTGATGCTTCCGCCACCCCAGATTTCTGACCAGGAACTGGATGAAATTGCAAGGATGGGTTATGCCAATGACCTAGCTGGGAGTGACGAATTTGGAGAAGGTAGTGCTGCAACACGTGCTCTTCTAGCAAATTATGCACAAACACCTGGCCGGGGAATGACTCCTTTACGAACCCCTCAGCGAACACCGGCTAGTAAAGGAGACGCTGTCATGATGGAAGCTGAAAACCTGGCGAGGTTGAGGGAGTCCCAGACACCATTATTAGGGGGAGAAAACCCAGAGTTGCATCCTTCGGATTTTACTGGGGTCACTCCTAAGAGAAAAGAGGTTCAGACCCCAAATCCAATGTTGACTCCTTCTGCAACTCCTGGAGTTGCAGGTCTCACTCCCAGAATTGGCATGACTCCTGCAAGAGATGGTTATGCTAGCATGACACCGAAGGGAACTCCTCTCAGGGATGAGCTTCGTATTAATGAGGATTTGGATATGCATGAGCGCGCTAAACTTGAGCTACAAAGAGCTGAAATAAGACGAAGTCTGTGCTCTGGTTTAGGAAGCCTTCCACAGCCCAAAAATGAGTACCAGATTGTCATGCAGCCCATTCCAGAAGATGCTGAAGAACCTGAGGAGAAGATTGAAGAGGATATGTCAGATAGAATAGCTAGAGAAAAGGCAGAAGAAGAGGCAAGGCAACAGGCATTACTTAGGAAACGATCAAAAGTCCTTCAAAGGGAGCTTCCTCGGCCTCCAGCTGCATCATTGGAGCTTATAAGAAATTCTTTGGTTAGAGCTGATGACAAGAGTTCCTTTGTTCCACCAACCTCAATTGAGCAAGCTGATGAGATGATAAGAAGGGAGCTTCTTGCTTTGCTGGAGCATGACAATGCTAAGTATCCGCTTGACGAGAAAGTAAATAAGGAGAAAAAGAAAGGAGCTAAGCGTGTGGTAAATGAGCCTGTTGTTCCTGTTATAGAAGACTTTCATGAAGAGGAGATGAAAGATGCTGATAAGTTGATAAAGGATGAGGCCCATTATCTTCGGGTAGCACTGGGACATGAAAGTGAACACCTTGAGGAATTCATTGAAGCACACAGGACTAGCCTGAATGATCTCATGTTCTTTCCAACCCGTCATGCCTATGGTCTCTCAAGTGTTGCTGGAAACATGGAAAAGCTGGCAGCTTTGCAGAATGAGTTTGAGAATGTGAGGAAAAAGTTGGACGATGGCAAGGAGAAAGTTGTAAAGCTTGAGAAGAAGGCAATACTCCTCACTCAAGGCTATGAGGTATGTTACTAA 2178 0.4587 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDVRQRRRKRKGIDYNAEIPFEKRPPPGFFDTADEDRPVEQPHFPTTIEELEGKRRIDVETQLRKQDIAKNKIAERQDAPSAILHANKLNDPETVRKQTKLMLPPPQISDQELDEIARMGYANDLAGSDEFGEGSAATRALLANYAQTPGRGMTPLRTPQRTPASKGDAVMMEAENLARLRESQTPLLGGENPELHPSDFTGVTPKRKEVQTPNPMLTPSATPGVAGLTPRIGMTPARDGYASMTPKGTPLRDELRINEDLDMHERAKLELQRAEIRRSLCSGLGSLPQPKNEYQIVMQPIPEDAEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLVRADDKSSFVPPTSIEQADEMIRRELLALLEHDNAKYPLDEKVNKEKKKGAKRVVNEPVVPVIEDFHEEEMKDADKLIKDEAHYLRVALGHESEHLEEFIEAHRTSLNDLMFFPTRHAYGLSSVAGNMEKLAALQNEFENVRKKLDDGKEKVVKLEKKAILLTQGYEVCY 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01570 725 CDD SANT_CDC5_II 55 106 - -
Adu02g01570 725 Coils Coil 679 713 - -
Adu02g01570 725 Coils Coil 451 471 - -
Adu02g01570 725 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Adu02g01570 725 MobiDBLite consensus disorder prediction 399 413 - -
Adu02g01570 725 Pfam pre-mRNA splicing factor component 406 651 IPR021786 -
Adu02g01570 725 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Adu02g01570 725 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 725 - -
Adu02g01570 725 Pfam Myb-like DNA-binding domain 10 70 - -
Adu02g01570 725 Coils Coil 167 187 - -
Adu02g01570 725 SMART sant 58 105 IPR001005 -
Adu02g01570 725 SMART sant 6 55 IPR001005 -
Adu02g01570 725 MobiDBLite consensus disorder prediction 113 150 - -
Adu02g01570 725 PANTHER - 1 725 - -
Adu02g01570 725 MobiDBLite consensus disorder prediction 380 423 - -
Adu02g01570 725 Gene3D - 60 114 - -
Adu02g01570 725 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Adu02g01570 725 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Adu02g01570 725 CDD SANT 10 53 IPR001005 -
Adu02g01570 725 Gene3D - 5 59 - -
Adu02g01570 725 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01570 Adu-Chr2 66424499 66430293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01570 1 722 MYB-Related Transcription Factor Family AT1G09770 79.258 0.0 1108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu02g01570 Myb_Cef 2.1e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01570 K12860 - gmx:100801352 1249.57