Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g01562 ATGGAGAGTGACAAGATGGAAGATTATGAAGTGATACAGCAGCTTGGAAGAGGAACATTGGGTGCCACTTTTCTTGTTCTCCATAAAACTCAGAAACAACGGTGTGTGCTCAAGAAGATTCGGTTCTCTAAGCAAACAGATAAGTCACAGCTATCATCAGCACCCCAAGAGATGAACCTGATTGCAAAACTAAGTAGCCCTTATATTGTGGAGTGCAAAGATGCTTGGGTAAAAAAGGGGGACTATGTATACATTATATCTGCTTATTGTGAAGGAGGTGACATGGCTCAGTATATAAAGAAAGCTCGAGGATCATTCTTCCCTGAGGAGAGAGTTTGCAAATGGATGACTCAGTTGTTGCTAGCTGTGGACTACCTGCACTCCAATCGAGTACTCCACAGAGATCTTAAGTGTTCCAACATACTCCTCACGAGAGACAATAACATTCAGCTAGGTGACTTTGGTCTTGCAAAGCTACTTAATAAAGAAGACCTTCCTTCCCCGGTTATTGGAACTCCAAACTACATGTGTCCTGAGCTTCTAGATAATATACCTTACGGTTATAAATCCGATATATGGGCCCTTGGTTGCTGCATGTTTGAAATCGTCGCACATCAACCAGCACTTCGTGCTCCGGACAGGGCAGGACTAATCAATAAGATAAATAGATCCTCGATTTCTCCATTTCCAATTGTTTACACTCCCACACTGAAACAACTGATTAAAAGCATGCTGAGGAGAAATCCAGAACATAGACCTACAGCAGCCGAGTTATTAAGGCATCCTCATTTACTACCTTATGTTCTTCGCTGTCGCAATGCATCGCCTGTTTTTCTTCCGGTACATCTCATAAATAGTAGCCCAAAGGATAAAACAAAGCAATCTCCCAAAAAATCTAGTGGTGGCAGAGATCATAGAGAAAAACAAGAAGGATTTGCAAATCATATGGAGCAAGTTCGTCTTACGGAGGTACATGTAACTAATCATCATAATGATGGCAAACTAAGAGTCTCGACAAGTGCCGAAGACTTCCTTGAAACCAAGATGGTTGATCCTACCAGCTACACGATGGAAACTGCAGCCAGTGTTAGTGGCTCGAAAGATGGGTCAATTACTTCTGATTCAACCATTTGCAGTGTGTGCAAGGAAGCAGACTTTAAAGGTAGACTTGCAAAGGAAGCAACAGAAAGTGAGATCACATCAAAGAGTACACTAGATTCTGTGAATGTGGAACAAGGATTTGCTGCTGAAAATTTTCTCCAGTCAGATTCAGTTAATGTAACTACAGCAGCCACAAAAATCGAAGACACTCTTCCCAAACCCATGGACTCCTGTAAATCAATAATGTCTAGTCAAGACAGTACTGTCGGCAATGATAAAGATGACTTTGTCAACGAAGAAAGATCATCCCCAGTTTTGCAGCCGGTCAGGCTCGAGAAAGACACCGAATCTGATAGCAGCTTAAAGAAAAGTGAAAACCATGATGTATTTACTGAAGTCTCACATTTGGACTGCTTGTCATCTGCAAGTAACGATACACTTCCCGGCAAGGATGAAGGCGTTGCAACCACAGCTGCGCATAAAGAAGGCAGTAATGCCGCAGTAGTTGTTGATAAAGCGACAAATGGCATTTCTTTAAGCAGACCTACTTCAAAAGGTGGGGACGGAACAACAAAGAGTGTGTTGATTAATAGATCCCAGAACAGAGCTGATGCTCTGGAAGCTTTGCTTGAGTTATGTGCTCAGCTGCTTAAACAAGGGAAACTTGATGAACTGGCTGCTGTGTTAAGACCATTTGGAGAAGACACTGTCTCATCAAGAGAAACAGCAATATGGCTGACAAAGAGTCTTCTTTCATCACAGAAATTTAATTCAGAAACCTAA 1884 0.4204 MESDKMEDYEVIQQLGRGTLGATFLVLHKTQKQRCVLKKIRFSKQTDKSQLSSAPQEMNLIAKLSSPYIVECKDAWVKKGDYVYIISAYCEGGDMAQYIKKARGSFFPEERVCKWMTQLLLAVDYLHSNRVLHRDLKCSNILLTRDNNIQLGDFGLAKLLNKEDLPSPVIGTPNYMCPELLDNIPYGYKSDIWALGCCMFEIVAHQPALRAPDRAGLINKINRSSISPFPIVYTPTLKQLIKSMLRRNPEHRPTAAELLRHPHLLPYVLRCRNASPVFLPVHLINSSPKDKTKQSPKKSSGGRDHREKQEGFANHMEQVRLTEVHVTNHHNDGKLRVSTSAEDFLETKMVDPTSYTMETAASVSGSKDGSITSDSTICSVCKEADFKGRLAKEATESEITSKSTLDSVNVEQGFAAENFLQSDSVNVTTAATKIEDTLPKPMDSCKSIMSSQDSTVGNDKDDFVNEERSSPVLQPVRLEKDTESDSSLKKSENHDVFTEVSHLDCLSSASNDTLPGKDEGVATTAAHKEGSNAAVVVDKATNGISLSRPTSKGGDGTTKSVLINRSQNRADALEALLELCAQLLKQGKLDELAAVLRPFGEDTVSSRETAIWLTKSLLSSQKFNSET 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g01562 627 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01562 627 Gene3D Transferase(Phosphotransferase) domain 1 92 341 - -
Adu02g01562 627 MobiDBLite consensus disorder prediction 285 309 - -
Adu02g01562 627 SUPERFAMILY Protein kinase-like (PK-like) 6 304 IPR011009 -
Adu02g01562 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Adu02g01562 627 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01562 627 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 4 466 - -
Adu02g01562 627 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 468 610 - -
Adu02g01562 627 MobiDBLite consensus disorder prediction 291 309 - -
Adu02g01562 627 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 468 610 - -
Adu02g01562 627 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 4 466 - -
Adu02g01562 627 CDD STKc_Nek 8 264 - -
Adu02g01562 627 Pfam Protein kinase domain 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g01562 627 MobiDBLite consensus disorder prediction 442 493 - -
Adu02g01562 627 MobiDBLite consensus disorder prediction 478 493 - -
Adu02g01562 627 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Adu02g01562 627 MobiDBLite consensus disorder prediction 444 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g01562 Adu-Chr2 65764039 65772339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g01562 15 264 MAP Kinase Kinase Kinase AT1G53570 32.283 5.42e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Adu02g01562 Pkinase 2.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g01562 K08857 - gmx:100793379 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g01562 02 65764039 65772339 Adu02g01562 02 65764039 65772339 ECH
Adu06g00931 06 11430883 11436149 Adu02g01562 02 65764039 65772339 PCT